Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq140 113 3e-20 >seq140 Length=127049 Score = 113 bits (124), Expect = 3e-20 Identities = 277/415 (67%), Gaps = 4/415 (1%) Strand=Plus/Minus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 |||| ||||| ||||||||||| || | ||||| || |||||||| || || || ||| Sbjct 6686 TGGCATTTGCTGCTGTTGAAGGTGTTTTCTTTTCCGGTTCATTTGCTGCAATTTTTTGGT 6627 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 | |||||| | | |||||||| ||| | ||||| || || |||||| | | || | Sbjct 6626 TAAAGAAAAAGGGGTTGATGCCAGGTTTGACTTTTTCAAATGAATTGATTTGTAGAGATG 6567 Query 22868 AAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTC 22927 |||| |||||| ||| ||||| ||| | | ||| || ||| ||| ||||| || Sbjct 6566 AAGGGCTACACACTGATTTTGCATGTCTATTATTTCAACATTTGGAAAATAAACCAGATC 6507 Query 22928 AGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCAAG 22987 | || | ||| || |||| || ||| ||||| | | || ||| Sbjct 6506 CAAAAATCGCTGAAAGAATTATTACTGAAGCTGTTTCTATTGAAAAAAGATATTTTGAAG 6447 Query 22988 AGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGT-ATGAGACTGTACATACAG 23046 | ||| | | || | ||||||||| || || | |||| | || | | Sbjct 6446 ATGCATTGCCTGTTTCTTTATTAGGTATGAATGCTG-CATTGATGAATCAATATGTTGAA 6388 Query 23047 TTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCAAT 23106 |||||||| ||| | | | | ||| | ||| ||| ||| ||||| ||| | ||| Sbjct 6387 TTTGTTGCTGATAGATTATTGGTTGCATTAGGTAATGAAAAATATTATAATGTTTCAAAT 6328 Query 23107 CCATTTGATTTCATGGATAACATTAGCATT-GAAGGTAAAACAAACTTCTTTGAA 23160 ||||||||||| ||||| || ||| |||| | ||||||||| || ||||||||| Sbjct 6327 CCATTTGATTTTATGGAAAATATT-TCATTAGCAGGTAAAACCAATTTCTTTGAA 6274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356232275812915