Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq82 464 9e-126 seq140 306 5e-78 >seq82 Length=13639 Score = 464 bits (514), Expect = 9e-126 Identities = 1474/2252 (65%), Gaps = 75/2252 (3%) Strand=Plus/Plus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 || || || |||| ||| || || | || || | | |||||||| || ||||| | | Sbjct 11184 GTAAACTGGATGGCAGCAGAAGCAGCTTGGGTTCTCAAGTAGTACATCCCTGTTTTCAAA 11243 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC-TGCTA 78835 || | ||| |||||||||||||| || ||||| || | || | || | Sbjct 11244 CCTTTAGACCACCCGTAGAAATGCATGGAGGTCAGTTTCCCCATTGTTGGGGCCATG--A 11301 Query 78836 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 78895 | |||||||| | ||| ||| |||||| ||||| || ||||| |||||||| | | Sbjct 11302 TGTGGATATTTAGAGAGTGAGATTGATCAATGAAAGCGGATCTGTCAGCAGCCATGTCGA 11361 Query 78896 TGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 78954 ||||||||||||| | | |||||||| ||||| || || || | ||| |||| ||| Sbjct 11362 TGATCGTCTTTTGAGACAATTCCCAAACTGTTTTGTACAAGTCTTTCAAT-TCTTGAGGA 11420 Query 78955 AGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCA 79011 | ||||| | |||||||| || | || || || | || || | || Sbjct 11421 ATGTTTGGCAAGTGTTGAATGGACCCGTTGTTGGCAATGATGTTTGATTTCATAGCATCG 11480 Query 79012 TTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 79070 ||||| ||| | || ||| |||| || | | ||||| || | ||| ||||| Sbjct 11481 TTCCA-AATGCCCAAATCAACCAAATCTCTTAGCAAGTATGGATTGACAATTTGGAATTC 11539 Query 79071 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATT 79130 |||||||| ||| | || ||| || || || ||||||| | |||| || | Sbjct 11540 ACCAGACAACGTTCTTCTAGAGTACATGTTTGAAGTGAATGGTTCGAAACATTCGTTGTA 11599 Query 79131 TCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAG 79190 ||||| ||||| | |||||||| |||||||| || |||| || || ||||| | Sbjct 11600 ACCCAAGATTTGCGATGTTGATGCTGTTGGCATTGGAGCCAATAACAATGAGTTTCTCAA 11659 Query 79191 ACC-GTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAA 79249 || || | | ||||| ||| | | ||||||||| ||||| | ||||| || | Sbjct 11660 TCCAGTTTCCACA-ATTTTTTCTCTCAAAGATTCCCATTCCCACAAATCAGTTGGAGCTC 11718 Query 79250 CATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCAT 79309 || ||| | ||| |||| | || ||| | ||| ||| ||| | | | || | Sbjct 11719 TATCCCACATGTCAAATTGCAAAACACCTTGTGAAGCTGGTGAACCTTGGAAAGATTGGT 11778 Query 79310 AAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTT 79369 | || ||||| | |||| | ||| | || ||||| | | || | |||| Sbjct 11779 ATGGACCTTCTTCCACGGCCATTTCGTTTGAAGATTCCAATGCAGCATGGTACAATGTTT 11838 Query 79370 CGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAA 79429 ||||||| | |||| || | || |||| | | |||||||||| | || || | Sbjct 11839 CGAAAATTTGAATATTCAGTTGTTTGGCTTGTTCGGAATCAAATGGAATTCTCAAAAGCA 11898 Query 79430 TAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAA 79489 |||| | || || || ||||||||||||| | |||||||| |||||| |||| || Sbjct 11899 TAAAAGTATCAGCCAAACCTTGAACACCAAGGGCAATAGGTCTGTGTCTCATATTTGAGT 11958 Query 79490 TTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGA 79546 || ||| ||| | ||| |||||||| | || || | | | || | ||| || Sbjct 11959 TTCTTGCAGTTTCC---ACAGGGTAATAATTTCTGTCAATGACTCTGTTCAAATTTCTTG 12015 Query 79547 CTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA---------TCGTCCATCTA 79597 || ||||| | ||||| | || ||| | |||||| | | | |||||| Sbjct 12016 TAATGACTTTTGCAACATCGTGTAATTTTTGGAAATCATAAGTTTGTTGTTGACCATCTT 12075 Query 79598 TTACAAACAT----------GTTCAACGCGACAGATGCCAGATTACAAACGGC---TACC 79644 | |||||| | ||| || | ||| |||| ||||||||| || | | Sbjct 12076 CTG-AAACATTGATGAAAGCGGGCAAAGCAATAGAAGCCAAATTACAAACAGCAGTTTCG 12134 Query 79645 TCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCT 79704 || ||| || | ||||| | |||||| || | ||| | || || |||||| Sbjct 12135 TCGTTA---TCTGAATATTCCACAATTTCACAACACAAATTAGATGATTTGATAGTTCCT 12191 Query 79705 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCA 79764 ||||||| ||||||| ||||||||||| ||||| || |||| ||| || || ||||| Sbjct 12192 AAATTTTTTTGATTAGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGTACCT 12251 Query 79765 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTG 79824 |||||| | || | ||| | || || | ||| | | | || |||| |||| || Sbjct 12252 GTTTCAGTTTGTGCTTCCAAGATAGCATACCATAATTTTTGTGC-TTTA--ATAGTTTTT 12308 Query 79825 -TATCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACA 79881 || ||||| |||| | ||| | || ||| ||| || || | || ||||| Sbjct 12309 CTACCTCTTCCTTCTGAAACATATCTATTGTACAATTTTTCAAAATCTGCACCATAAACA 12368 Query 79882 TCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACT 79941 || ||| || ||| ||| ||| | | ||| | ||| ||| || || || ||| Sbjct 12369 TCACTTAAACCTGGAGCTTCACTTGGAGAAAACAATGTCCAATCTGAATTTTCTTTAACT 12428 Query 79942 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCC 80001 || |||||| | ||| |||| ||| | || ||| | |||||| | |||| || Sbjct 12429 TTTTGCATAAATAAATCTGGAACCCATAATGCAGGAAACAAATCTCTTGCTCTAATTTCT 12488 Query 80002 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 80061 || || || ||| || || ||| | || | | ||||||| |||||| ||||| Sbjct 12489 TCTTTACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATGCCATGGTTCT 12548 Query 80062 AAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 80121 || || | || | | | || |||| ||| || || || ||||| | ||||| || || Sbjct 12549 AAATAAAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTTGCAGTA 12608 Query 80122 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATA 80181 ||||| ||||||| | ||||||||| | ||||| || || ||||| || || | ||| Sbjct 12609 TTATTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTCCCATTAGTACCTGCAATA 12668 Query 80182 TAGCTTCCACTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTTAGA 80240 || || | | | ||||||| ||| ||| ||||| || || || || ||||||| Sbjct 12669 TAAGAACCGGTTGATCTAATATTATGAATATGA-AGACCAATACCACCAGCAGTTTTAGA 12727 Query 80241 GATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTT 80300 || || || ||| |||||| |||||||| || || || ||| ||| || |||| Sbjct 12728 AATCAAAGCACATTCTTTTAAAGTATCATAAATACCATCAATGGAATCGTCTTTCATAGC 12787 Query 80301 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 80360 || || ||||| ||||||||| | | ||||| ||||| ||||| || ||||| Sbjct 12788 AACAAGGAAACATGAAGACATTTGAGGTCTTGGTGTTCCAGCATTGAATAAAGTTGGAGA 12847 Query 80361 AGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC 80420 || || || || || | ||||| | ||| || || || | || ||| ||||| Sbjct 12848 TGCATGTGTGAAATATCTCAAAGACATCAAATTATAAGTTTCCAAGACTTTTTCAATATC 12907 Query 80421 CCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 80480 | |||||| || || || || | ||| | || || |||||||||||| | || || Sbjct 12908 TGAACCATGAATCCCGACAGCAACTCTCATGATCAAATGTTGAGGTCTTTCAGCAAT-TT 12966 Query 80481 GT-TATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATG 80539 || ||| ||| | || || || ||| ||||||| ||||| ||||||||||| || ||| Sbjct 12967 GTCCATTGATTCTTAATAAATACGATCTTTCCAATGTTTTGAAACCAAAATAATTATATT 13026 Query 80540 AAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACA- 80598 || |||| || |||| |||| | || | ||| |||| ||| | ||||| Sbjct 13027 GGAAATCTCTATCATAAACAATAGCACTATTTAAAACATCTTTATTTTTTT---CTACAA 13083 Query 80599 -TCCAT---GGTGAT-ACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACAT 80653 | || || || ||| ||| || ||||| | | |||||||| |||||||| Sbjct 13084 TTTGATAAACGTCATCACT---AATCATTGGAGATTTTAATCCATTTTTTTCATTAACAT 13140 Query 80654 AGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTG 80713 | ||||||| || |||| | |||| ||||||| |||| || |||| ||| | Sbjct 13141 AAAAATATAAATCTGAAATGACTTGAGAAAATTGTTTTTTAGTTTGTTTATGTAAATTAG 13200 Query 80714 ATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG--TTGT-GTAGTACAAGTGG 80770 | | || ||||| || || || | |||||||| ||||| | || || || || | Sbjct 13201 AAATAGCAATTCTTGCAGCCAATGTAGCATAATCAGGATGAATAGTGGTCATATAA---G 13257 Query 80771 CTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTT 80830 | | |||| || |||| | | |||||||| | || || || || | ||| | || Sbjct 13258 CACATGTTTCAGCAGCCAAATTATCCAATTCAATAGTAGTAACACCTTCATAAACACCAG 13317 Query 80831 GGATAA-CCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACAT 80889 |||| ||| | | || || |||||| ||||| | | | ||| ||||||||| Sbjct 13318 ATATAATTCTTTGT-GTAATAGAAACAGGATCAATATGGTTTGGATCTAAACCATAACAT 13376 Query 80890 AATTTTCTAATACGAGACGTGATTTTATCAAA 80921 ||| | ||| | ||| |||||||||||||| Sbjct 13377 AATCTAGCAATTCTAGAAGTGATTTTATCAAA 13408 >seq140 Length=127049 Score = 306 bits (338), Expect = 5e-78 Identities = 608/895 (68%), Gaps = 8/895 (1%) Strand=Plus/Plus Query 49656 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 49715 |||||| || |||||| || ||| || | |||||| || ||||| ||||| ||| | Sbjct 6238 CATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGC 6297 Query 49716 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 49775 ||||| ||||||||||| |||||||| ||||| | |||||||||| ||||| | || Sbjct 6298 TAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCATTACC 6357 Query 49776 CAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATT 49835 ||| || | |||||||| || |||||||| | |||| ||||||| | || ||| Sbjct 6358 TAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATT 6417 Query 49836 CATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGC 49895 ||| |||| | ||| || | || | || | || || |||||| || || || Sbjct 6418 CATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACAGC 6477 Query 49896 ATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACAT 49955 || || ||||| | | || ||| | | ||| || ||||||| ||| | Sbjct 6478 TTCAGTAATAATTCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAATAA 6537 Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 | |||||| ||||| ||| || || || ||||||| ||| | ||| || ||||| || Sbjct 6538 TAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAAGT 6597 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 | || ||||| | || || || | |||||| || | |||||||| || ||||| Sbjct 6598 CAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAAAA 6657 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATA-ACTGGCGCTG--TC 50132 ||| | ||||| || || ||||| || || | ||| || || | | || || || Sbjct 6658 GAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCATC 6717 Query 50133 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 50192 || ||||| | |||||| || || || | ||| | || || ||||| || || Sbjct 6718 TTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATAGC 6777 Query 50193 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 50252 ||| || | | | |||| || |||||| | |||||||||||||||||| ||| Sbjct 6778 ATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGCGAATA 6837 Query 50253 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 50312 |||| ||| || ||||| || || || || ||||| |||||| |||| || | Sbjct 6838 TGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTCTGG 6897 Query 50313 AATCTGCACTTCTGTAC-AAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGG 50371 |||||||||||| | || |||| | || | ||||| ||||| || || || || | Sbjct 6898 AATCTGCACTTCAGCACTGAAATTCTCCA-CCAAATTCTCATTGACAATCCCATCTGAAG 6956 Query 50372 CTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGT---TTAT 50428 | || ||||| || || || | || ||| | |||| || | | | |||| Sbjct 6957 CAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTATTAT 7016 Query 50429 TCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTG 50488 |||| || | ||||||||| || | ||| | |||||| | ||||||||||| || || | Sbjct 7017 TCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGCTTCAG 7076 Query 50489 CCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 50543 | ||| || | |||||| ||||| |||| |||||| || | ||||||||| Sbjct 7077 CACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATCT 7131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718266061600200