Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq140 379 2e-100
>seq140
Length=127049
Score = 379 bits (420), Expect = 2e-100
Identities = 636/901 (71%), Gaps = 19/901 (2%)
Strand=Plus/Plus
Query 13569 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13628
||||| || ||||||||| ||| |||||||||||||||||| || ||||||||| |
Sbjct 6239 ATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGCT 6298
Query 13629 AGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATAAACAC-TTTATCACAACC 13687
| ||| ||||||||||||||||||||||||||| |||| | | ||| ||| |||
Sbjct 6299 AATGAAATATTTTCCATAAAATCAAATGGATTTGAA-ACATTATAATATTTTTCATTACC 6357
Query 13688 TAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATT 13747
|| | | | | |||||||||||||| ||| |||| ||||||| ||| || || |||
Sbjct 6358 TAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATT 6417
Query 13748 CATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAAT-TCTTTTT-CTATAGACACA 13805
|||||||| || ||||| | | || || ||||| ||||||| | ||||| |||
Sbjct 6418 CATACCTAATAAAGAAACAGGCAATGCATC--TTCAAAATATCTTTTTTCAATAGAAACA 6475
Query 13806 GCCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTT--AGATGTTTAA 13863
|| || | ||||| || | || | || || | |||||| | ||||| ||
Sbjct 6476 GCTTCAGTAATAATTCTTTCAGCGATTT--TTGGATCTGGTTTATTTTCCAAATGTTGAA 6533
Query 13864 AAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAA 13923
| | || ||| ||||||||| || || || |||||||||| ||| | ||| |||||||
Sbjct 6534 ATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAA 6593
Query 13924 ATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGG 13983
| || || ||||||||||| || ||| ||||||||||| |||||||||||||| ||||
Sbjct 6594 AAGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGG 6653
Query 13984 AAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTT 14043
||||||| | || ||||| |||||||| || | |||| ||| |||| |||| | ||
Sbjct 6654 AAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTT 6713
Query 14044 TGT-TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCA 14102
| | || |||||| | |||||||||||| ||||| ||| || || ||||||
Sbjct 6714 CATCTTGA-ATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCA 6772
Query 14103 ATAGCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAG 14162
|||||||| || || |||| | ||||| | | | || || ||||| || | |||
Sbjct 6773 ATAGCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCA-AAAG 6831
Query 14163 C-TATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGC 14221
| ||| ||||| || || |||||||| || || || || ||||| ||| ||||
Sbjct 6832 CGAATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGC 6891
Query 14222 TTCCGACCATTGTACTTCCG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCAT 14280
||| | || ||||| | | | |||| | || ||||||| ||||| || || ||||
Sbjct 6892 TTCTGGAATCTGCACTTCAGCACTGAAAT-TCTCCACCAAATTCTCATTGACAATCCCAT 6950
Query 14281 CACTAGCTGCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGTTGA 14337
| ||| || |||||||| || | | |||| ||| | || | | |||||| |
Sbjct 6951 CTGAAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTC 7010
Query 14338 GTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAG 14397
|| ||||| ||| | ||| || |||||||| | ||| || | |||||||| ||
Sbjct 7011 TATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAG 7070
Query 14398 CGACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATC 14457
| |||| ||| || | ||| ||||| | ||| || ||||| | |||||||
Sbjct 7071 CTTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATC 7130
Query 14458 T 14458
|
Sbjct 7131 T 7131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479726171037000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |