Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq82 426 2e-114 seq140 280 2e-70 >seq82 Length=13639 Score = 426 bits (472), Expect = 2e-114 Identities = 1454/2245 (65%), Gaps = 61/2245 (3%) Strand=Plus/Plus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 |||||||| |||| || || || |||| || | | |||||||| |||||||| | | Sbjct 11184 GTAAACTGGATGGCAGCAGAAGCAGCTTGGGTTCTCAAGTAGTACATCCCTGTTTTCAAA 11243 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCGGCTAT 70919 || | ||| ||||| |||||||| || ||||| || | | || | || Sbjct 11244 CCTTTAGACCACCCGTAGAAATGCATGGAGGTCAGTTTCCCCATTGTTGGGGCCATG-AT 11302 Query 70920 GTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 70979 ||| ||||| | || ||| |||||| ||||| || ||||| |||||||| | || Sbjct 11303 GTGGATATTTAGAGAGTGAGATTGATCAATGAAAGCGGATCTGTCAGCAGCCATGTCGAT 11362 Query 70980 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAA 71038 |||||||||||| | | |||||||| ||||| || || || | ||| |||| |||| Sbjct 11363 GATCGTCTTTTGAGACAATTCCCAAACTGTTTTGTACAAGTCTTTCAAT-TCTTGAGGAA 11421 Query 71039 GGTTTGTA---TTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCAT 71095 ||||| | |||||||| || | ||||| || | ||| || | || | Sbjct 11422 TGTTTGGCAAGTGTTGAATGGACCCGTTGTTGGCAATGATGTTTGATTTCATAGCATCGT 11481 Query 71096 TCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCT 71154 |||| ||| | || ||| |||| || | | ||||| || | ||| ||||| Sbjct 11482 TCCA-AATGCCCAAATCAACCAAATCTCTTAGCAAGTATGGATTGACAATTTGGAATTCA 11540 Query 71155 CCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTT 71214 |||||||| ||| | || ||| || || || | ||||| | | || || | Sbjct 11541 CCAGACAACGTTCTTCTAGAGTACATGTTTGAAGTGAATGGTTCGAAACATTCGTTGTAA 11600 Query 71215 CCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGA 71274 ||||| ||||| | |||||||| || ||||| || |||| || | ||||| | Sbjct 11601 CCCAAGATTTGCGATGTTGATGCTGTTGGCATTGGAGCCAATAACAATGAGTTTCTCAAT 11660 Query 71275 CCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACAACN 71334 ||| | ||||| ||| | | ||||||||| | ||| | ||| | ||| | Sbjct 11661 CCAGTTTCCACAATTTTTTCTCTCAAAGATTCCCATTCCCACAAATCAGTTGGAGCTCTA 11720 Query 71335 NNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATGTATCGTAT 71394 | || | ||| ||| ||| | | | |||| Sbjct 11721 TCCCACATGTCAAATTGCAAAACACCTTGTGAAGCTGGTGAACCTTGGAAAGATTGGTAT 11780 Query 71395 GGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCG 71454 || ||||||| |||| | ||| | || ||||| ||| || | |||||| Sbjct 11781 GGACCTTCTTCCACGGCCATTTCGTTTGAAGATTCCAATGCAGCATGGTACAATGTTTCG 11840 Query 71455 AAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATA 71514 ||||| | |||| || | || |||| | |||||||||| | || || ||| Sbjct 11841 AAAATTTGAATATTCAGTTGTTTGGCTTGTTCGGAATCAAATGGAATTCTCAAAAGCATA 11900 Query 71515 AACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATT 71574 || | || || || |||||||| |||| | ||||||||||||||| |||| || || Sbjct 11901 AAAGTATCAGCCAAACCTTGAACACCAAGGGCAATAGGTCTGTGTCTCATATTTGAGTTT 11960 Query 71575 T---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACT 71631 ||| ||| | ||| |||||||| | || || | | | || | |||||| Sbjct 11961 CTTGCAGTTTCC---ACAGGGTAATAATTTCTGTCAATGACTCTGTTCAAATTTCTTGTA 12017 Query 71632 ATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTC---------CCATCTATT 71682 || ||||| | ||||| | || ||| | |||||| | | |||||| | Sbjct 12018 ATGACTTTTGCAACATCGTGTAATTTTTGGAAATCATAAGTTTGTTGTTGACCATCTTCT 12077 Query 71683 ---ACA------AACACGTTCAAGGCAACAGATGCCAGATTACAAACGGC---TACCTCA 71730 ||| || || ||| |||| ||| |||| ||||||||| || | | || Sbjct 12078 GAAACATTGATGAAAGCGGGCAAAGCAATAGAAGCCAAATTACAAACAGCAGTTTCGTCG 12137 Query 71731 TTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 71790 ||| || | ||||| | ||||||| || | |||| | ||||| ||||||||| Sbjct 12138 TTA---TCTGAATATTCCACAATTTCACAACACAAATTAGATGATTTGATAGTTCCTAAA 12194 Query 71791 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTT 71850 |||| ||||||| ||||||||||| ||||| || |||| |||||| || ||||| ||| Sbjct 12195 TTTTTTTGATTAGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGTACCTGTT 12254 Query 71851 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTAT 71910 ||| | || | ||| | || || | ||| | | | || |||| || || || || Sbjct 12255 TCAGTTTGTGCTTCCAAGATAGCATACCATAATTTTTGTGC-TTTAATAGTTT-TTCTAC 12312 Query 71911 CTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGT 71968 ||||| |||| | ||| | || ||| ||| || || | || || ||| Sbjct 12313 CTCTTCCTTCTGAAACATATCTATTGTACAATTTTTCAAAATCTGCACCATAAACATCAC 12372 Query 71969 CTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTT 72028 ||| || ||| |||| | ||| | | ||||| ||| ||| || || || ||| || Sbjct 12373 TTAAACCTGGAGCTTCACTTGGAGAAAACAATGTCCAATCTGAATTTTCTTTAACTTTTT 12432 Query 72029 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGT 72088 |||||| | ||| |||| ||| | || ||| | |||||| | |||| || || | Sbjct 12433 GCATAAATAAATCTGGAACCCATAATGCAGGAAACAAATCTCTTGCTCTAATTTCTTCTT 12492 Query 72089 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 72148 | || ||| || || ||| | || | | ||||||| |||||| ||||| || | Sbjct 12493 TACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATGCCATGGTTCTAAAT 12552 Query 72149 ATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 72208 | | || | | | || || | ||| || || || ||||| | ||||| || || |||| Sbjct 12553 AAAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTTGCAGTATTAT 12612 Query 72209 TATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGC 72268 | ||||||| | ||||||||| | ||||| || | ||||| || || | ||||| Sbjct 12613 TGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTCCCATTAGTACCTGCAATATAAG 12672 Query 72269 TTCCACTGGCACGAATATTGCTAAT-TGATAGACCTATTCCCCCTGCCATTTTAGAGATT 72327 || | | | |||||| ||| ||| ||||| || || || || ||||||| || Sbjct 12673 AACCGGTTGATCTAATATTATGAATATGA-AGACCAATACCACCAGCAGTTTTAGAAATC 12731 Query 72328 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 72387 || || ||| |||||| |||||||| || || || || ||| || |||| || Sbjct 12732 AAAGCACATTCTTTTAAAGTATCATAAATACCATCAATGGAATCGTCTTTCATAGCAACA 12791 Query 72388 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 72447 || ||||| ||||||||| | | ||||| ||||| ||||| || ||||| || Sbjct 12792 AGGAAACATGAAGACATTTGAGGTCTTGGTGTTCCAGCATTGAATAAAGTTGGAGATGCA 12851 Query 72448 TGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCAT 72507 || || || || | ||||| | ||| || || || | || ||| ||||| | Sbjct 12852 TGTGTGAAATATCTCAAAGACATCAAATTATAAGTTTCCAAGACTTTTTCAATATCTGAA 12911 Query 72508 TGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGT-T 72566 ||| || || || || || | ||| | || ||| |||||||||||| | || |||| Sbjct 12912 CCATGAATCCCGACAGCAACTCTCATGATCAAATGTTGAGGTCTTTCAGCAAT-TTGTCC 12970 Query 72567 ATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 72626 ||| ||| | || || || ||| ||||||| ||||| ||||||||||| || ||| || Sbjct 12971 ATTGATTCTTAATAAATACGATCTTTCCAATGTTTTGAAACCAAAATAATTATATTGGAA 13030 Query 72627 GTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATAT--CC 72684 |||| || |||| |||| | ||| | ||| |||| ||| | || || | Sbjct 13031 ATCTCTATCATAAACAATAGCACTATTTAAAACATCTTTATTTTTTTCTACAATTTGATA 13090 Query 72685 ATGGTGAT-ACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAA 72743 | || || ||| ||| || ||||| | | |||||||| ||||||||| | Sbjct 13091 AACGTCATCACT---AATCATTGGAGATTTTAATCCATTTTTTTCATTAACATAAAAATA 13147 Query 72744 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGC 72803 |||||| || |||| | |||| ||||||| |||| || |||| ||| || | || Sbjct 13148 TAAATCTGAAATGACTTGAGAAAATTGTTTTTTAGTTTGTTTATGTAAATTAGAAATAGC 13207 Query 72804 TATTCTGGCGGCTAGAATGGCATAATCTGGATG--TTGT-GTAGTACAAGTGGCTGCTAT 72860 ||||| || || | | |||||||| ||||| | || || || || || | | Sbjct 13208 AATTCTTGCAGCCAATGTAGCATAATCAGGATGAATAGTGGTCATATAA---GCACATGT 13264 Query 72861 TTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAA- 72919 ||| || |||| | | |||||||| | || || || || | ||| | || |||| Sbjct 13265 TTCAGCAGCCAAATTATCCAATTCAATAGTAGTAACACCTTCATAAACACCAGATATAAT 13324 Query 72920 CCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTC 72979 ||| | | || || |||||| ||||| | | | ||| |||||||||||| | Sbjct 13325 TCTTTGT-GTAATAGAAACAGGATCAATATGGTTTGGATCTAAACCATAACATAATCTAG 13383 Query 72980 TAATACGAGACGTGATTTTATCAAA 73004 ||| | ||| |||||||||||||| Sbjct 13384 CAATTCTAGAAGTGATTTTATCAAA 13408 >seq140 Length=127049 Score = 280 bits (310), Expect = 2e-70 Identities = 605/898 (67%), Gaps = 14/898 (2%) Strand=Plus/Plus Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820 |||||| || |||||| || ||| || | |||||| || ||||| || || ||| | Sbjct 6238 CATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGC 6297 Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 41880 ||||| ||||||||||| |||||||| ||||| | |||||||||| ||||| | || Sbjct 6298 TAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCATTACC 6357 Query 41881 CAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATT 41940 ||| || | |||||||| || | ||||| | |||| ||||||| | || ||| Sbjct 6358 TAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATT 6417 Query 41941 CATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGC 42000 ||| |||| | ||| || | || | || | || || ||||||||| || || Sbjct 6418 CATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACAGC 6477 Query 42001 GTCTGTTATAATAGATCTTACTGT--TTCTTCACTC-GGTGGATACAATAAATGTTTAAA 42057 || || ||||| |||| | | || || || ||| || ||||||| ||| Sbjct 6478 TTCAGTAATAAT---TCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAA 6534 Query 42058 CATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAA 42117 | | |||||| ||||| ||| || || |||||||||| ||| ||||| || ||||| Sbjct 6535 TAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAA 6594 Query 42118 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGA 42177 || | || ||||| | || || || | |||||| || | |||||||| || || Sbjct 6595 AGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGA 6654 Query 42178 AAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTC 42237 |||||| | ||||| || || ||||| || | | ||| || || | ||| || Sbjct 6655 AAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTC 6714 Query 42238 ATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 42294 || | ||||| | |||||| || || || | ||| | || || ||||| || Sbjct 6715 ATCTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAAT 6774 Query 42295 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACT 42354 ||||| || | | | |||| || |||||| | ||| |||||||||||||| Sbjct 6775 AGCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGCGA 6834 Query 42355 ATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTC 42414 ||| |||| ||| || ||||| || || || || ||||| |||||| | || || Sbjct 6835 ATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTC 6894 Query 42415 GGTAACCTGTACTTCTGTACA-AAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCAC 42473 | || ||| ||||| | || |||| | || | ||||| || || || || || || Sbjct 6895 TGGAATCTGCACTTCAGCACTGAAATTCTCCACC-AAATTCTCATTGACAATCCCATCTG 6953 Query 42474 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT---T 42530 || || ||||| || || || | || ||| || |||| | | | | | Sbjct 6954 AAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTAT 7013 Query 42531 TATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTT 42590 ||||||| || | ||||||||| || | ||| | ||||||| | ||||||||||| |||| Sbjct 7014 TATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGCTT 7073 Query 42591 CTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCT 42648 | || ||| || | |||||| ||||| |||| ||||| || | ||||||||| Sbjct 7074 CAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATCT 7131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671136641281800