Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq182 109 4e-19 seq230 98.7 7e-16 >seq182 Length=55006 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||||||||| || ||||| || || ||| ||||||||||| || || || Sbjct 1893 ACCACCTCTCAATCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGA 1834 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | |||| ||||||||||| || ||||| ||||| | ||| ||||| | || Sbjct 1833 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 1774 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||||||| ||| ||||| ||| || | ||| || || | | || || Sbjct 1773 GATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGAC 1714 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| |||||||| || ||||| || || || |||||||| Sbjct 1713 TTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCAT 1666 >seq230 Length=21327 Score = 98.7 bits (108), Expect = 7e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||||||||| || ||||| || || ||| ||||||||||| || || || Sbjct 13666 ACCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGA 13607 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | |||| ||||||||||| || ||||| ||||| | ||| ||||| | || Sbjct 13606 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 13547 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||||||| ||| ||||| |||||| || | | || || | | || || Sbjct 13546 AATACCTTCTTTGTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGAC 13487 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAA 44112 || | || || || ||||| ||||| || || ||||| Sbjct 13486 TTCTAGAGTGATAGTCTTACCAGTTAAGGTTTTGACAAA 13448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354776281225140