Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq140 297 2e-75
>seq140
Length=127049
Score = 297 bits (328), Expect = 2e-75
Identities = 591/854 (69%), Gaps = 21/854 (2%)
Strand=Plus/Plus
Query 12842 TTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTT 12901
|||| ||||||| ||||||||| || ||||||||||||||| || || |||||
Sbjct 6233 TTTGCCATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTA 6292
Query 12902 CCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACA--ATAGTATTTTT 12959
||| |||| |||||||||||||||||||| || ||| ||| |||| ||| |||||||
Sbjct 6293 CCTGCTAATGAAATATTTTCCATAAAATCAAATGGA--TTTGAAACATTATAATATTTTT 6350
Query 12960 TACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAAT 13019
| |||||| | | || ||||| ||||||||||| || | || || ||||| ||
Sbjct 6351 CATTACCTAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATG 6410
Query 13020 CACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATAT 13079
|| ||||| |||| ||| ||||||| || ||| ||| | ||||||| |||
Sbjct 6411 CAGCATTCATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAG 6470
Query 13080 CAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTA-ATGGAGGATTTGATAGATGC 13138
||| ||||| ||| || ||| | | || | | ||| |||| | |||
Sbjct 6471 AAACAGCTTCAGTAA-TAATTCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGT 6529
Query 13139 TTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTT 13198
| ||| | | ||||||||||||| ||| | ||||||||||||| || | || |||
Sbjct 6530 TGAAATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTT 6589
Query 13199 GAAAATGTTAGACCCGGCAT-AAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGA 13257
||||| || | ||| ||||| || |||| || ||||| |||||| || |||||||| ||
Sbjct 6590 GAAAAAGTCAAACCTGGCATCAACCCCTTTTTCTTTAA-CCAAAAAATTGCAGCAAATGA 6648
Query 13258 ACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACT 13317
||| ||||| || | |||||||| || ||||| || | ||| |||||| || | || |
Sbjct 6649 ACCGGAAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAA--TAAT 6706
Query 13318 --ATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATA 13375
|| || | | ||||| | | ||||| | ||||||| ||| | |||
Sbjct 6707 GCATCTTCATCTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATA 6766
Query 13376 TTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATC 13435
|||| || || || || || | | |||| || ||| ||||||||||| |||
Sbjct 6767 GTTTCAATAGCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATC 6826
Query 13436 AATAAGC-TATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACA 13494
|| |||| ||| |||| ||| |||||||||||| |||||||| || ||||||||
Sbjct 6827 AA-AAGCGAATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACA 6885
Query 13495 TCTAGCCTCTGATACCTGAACTTC-GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTA 13553
| |||| |||| | ||| ||||| | | | |||| | || | || || || || || |
Sbjct 6886 TTTAGCTTCTGGAATCTGCACTTCAGCACTGAAAT-TCTCCACCAAATTCTCATTGACAA 6944
Query 13554 TCCCGTCACTAGCAGCaaaaaaaGC-AAGTATGTGCTTAATAAAttttttttCGTTTTCT 13612
|||| || |||||| ||||| || || | | | |||| || | |||| |||||
Sbjct 6945 TCCCATCTGAAGCAGCGAAAAATGCTAAAACTCTAC-TAATGAAAAATCTTTCATTTTCA 7003
Query 13613 GACA-ACT-TTA-ACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAA 13669
|| || ||| ||| || | | |||||| || | ||| | || || | ||||||
Sbjct 7004 TTCATTCTATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAA 7063
Query 13670 AAAGAAGCAACAGC 13683
|| ||||| ||||
Sbjct 7064 AATGAAGCTTCAGC 7077
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430980797957610
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |