Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq140 242 9e-59
seq230 150 4e-31
seq70 113 1e-19
>seq140
Length=127049
Score = 242 bits (268), Expect = 9e-59
Identities = 625/933 (67%), Gaps = 27/933 (3%)
Strand=Plus/Minus
Query 268673 GAACCGCTTTTAGTAAATAACCCAGATAGATTTGTGATATTTCCAATACAGCATGGTGAT 268732
|||||||| || || | ||| | |||||||| | |||||||| | | |||
Sbjct 7158 GAACCGCTATTGGTGGAAAACAAAAGAAGATTTGTTTTGTTTCCAATCAAATACCATGAA 7099
Query 268733 ATATGG-AGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCT 268791
|| ||| | | | ||||||| || | ||||| |||||||||| ||||||| | |||||
Sbjct 7098 ATCTGGCAAGCT-TACAAACGTGCTGAAGCTTCATTTTGGACTGCAGAAGAAATCGATCT 7040
Query 268792 GTCTTATGACTTAATAGATTGGAAAAATTTAA--AACCAGAA-GAAAGAAGATTTATATC 268848
|| | || | || ||||| ||| || || | || |||||| || || |
Sbjct 7039 TTCCAAAGATATCCACGACTGGAATAATAGAATGAATGAAAATGAAAGATTTTTCAT-TA 6981
Query 268849 TTATATTCTT-GCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGA 268907
|| | | || || ||||| || | | ||||| || || || || ||| | || ||||
Sbjct 6980 GTAGAGTTTTAGCATTTTTCGCTGCTTCAGATGGGATTGTCAATGAGAATTTGGTGGAGA 6921
Query 268908 AGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTA 268967
| ||| || || || |||||||| ||||| | |||||||||||| ||||| || |
Sbjct 6920 ATTTCAGTGCTGAAGTGCAGATTCCAGAAGCTAAATGTTTTTACGGGTTCCAAATCATGA 6861
Query 268968 TAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACA 269027
| |||||||| ||| || | || || || || ||||||||||| | ||| |
Sbjct 6860 TGGAAAATATCCATAGTGAAACATATTCGCTTTTGATCGATACTTATATCAAAGATCCAA 6801
Query 269028 ACGAAAAGAAAAGACTATTTTC--TTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTC 269085
| |||| | || || | ||| | |||| |||||| | | | ||||| |
Sbjct 6800 AAGAAA-GTGAATTCT-TGTTCAATGCTATTGAAACTATTCCACAAATCAAAGAAAAAGC 6743
Query 269086 TGAATGGGCTCTGAAATGGATAAACGAT-AGCGCGCCTTA--CGGAGAAAGGTTAGTTGC 269142
|||||||||| | | |||||| | ||| | || ||| | ||||| || || ||
Sbjct 6742 TGAATGGGCTATTAGATGGATTCAAGATGAAGATGCATTATTTGCTGAAAGATTGGTGGC 6683
Query 269143 TTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAA 269202
||||| ||||| |||||| | |||||||| || || ||||| || || |||||||| ||
Sbjct 6682 ATTTGCTGCTGTTGAAGGTGTTTTCTTTTCCGGTTCATTTGCTGCAATTTTTTGGTTAAA 6623
Query 269203 GAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGG 269262
||||| || | |||||||| || ||||| || || |||||||| | || || |||||
Sbjct 6622 GAAAAAGGGGTTGATGCCAGGTTTGACTTTTTCAAATGAATTGATTTGTAGAGATGAAGG 6563
Query 269263 TTTACACTGCGACTTCGCTTGTTTATTATTTACTAATTATCTTTCACACAAACCTTCTCA 269322
||||| || || || ||| ||||||| | | || | | | ||||| ||
Sbjct 6562 GCTACACACTGATTTTGCATGTCTATTATT---TCAACATTTGGAAAATAAACCAGATCC 6506
Query 269323 AGATAGAGTATACGAAATTATAGATTCAGCTGTTTCTGTAG-AAACAGA-ATTTCTAACG 269380
| | | | | |||||| | |||||||||| | | ||| ||| |||| ||
Sbjct 6505 AAAAATCGCTGAAAGAATTATTACTGAAGCTGTTTCTATTGAAAAAAGATATTTTGAA-- 6448
Query 269381 GAAGCTCTATCTATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAAG 269440
|| || | || | | | | ||||||||| || ||||| ||||| || |
Sbjct 6447 GATGCATTGCCTGTTTCTTTATTAGGTATGAATGCTGCATTGATGAATCAATATGTTGAA 6388
Query 269441 TTCGTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAAAA---TATAACGTTGAA 269497
|| || |||||||||| |||| | ||||| || | ||||| ||||| ||| |
Sbjct 6387 TTTGTTGCTGATAGATTATTGGTTGCATTAGG---TAATGAAAAATATTATAATGTTTCA 6331
Query 269498 AATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAG 269557
||||| ||| ||||||||| ||||| ||||||| |||||| | |||||||| || ||
Sbjct 6330 AATCCATTTGATTTTATGGAAAATATTTCATTAGCAGGTAAAACCAATTTCTTTGAAAAA 6271
Query 269558 CGGGTAAGTAACTATCAGAAAATGGGTGTAATG 269590
| || | | ||||| ||| ||||| |||
Sbjct 6270 AGAGTTTCTGATTATCAAAAAGCAGGTGTTATG 6238
>seq230
Length=21327
Score = 150 bits (166), Expect = 4e-31
Identities = 146/188 (78%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| |||||||| ||||| || |||||||| | ||||||||| ||||| | |||||| |||
Sbjct 13635 GTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCA 13576
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | || ||||| ||||| || || |||||||| || || || || |||||
Sbjct 13575 GCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGGATTTTGGCTTTG 13516
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||| ||| | ||| || ||||| || |||||||||||||| | |||
Sbjct 13515 ACGTTATCGATGGTGTCGGAGGATTCGACTTCTAGAGTGATAGTCTTACCAGTTAAGGTT 13456
Query 104543 TTTACAAA 104550
|| |||||
Sbjct 13455 TTGACAAA 13448
>seq70
Length=20209
Score = 113 bits (124), Expect = 1e-19
Identities = 145/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || || || || || ||||| || | ||||| |||||||| | ||||| |||
Sbjct 19608 GTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCCGTCTTCCAACTGTTTACCA 19667
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| | || ||||| ||||| || || |||||||| ||||| ||||| | ||
Sbjct 19668 GCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTGTCCTGGATCTTGGACTTG 19727
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||| || | ||| || || | || || || || ||||| | |||
Sbjct 19728 ACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAAGTGATGGTTTTCCCAGTCAAAGTT 19787
Query 104543 TTTACAAATATCTGCATTTT 104562
|| ||||| || ||||||||
Sbjct 19788 TTAACAAAAATTTGCATTTT 19807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151393900550940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |