Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq121 131 2e-25 seq124 105 8e-18 seq167 93.3 5e-14 >seq121 Length=33403 Score = 131 bits (144), Expect = 2e-25 Identities = 258/378 (68%), Gaps = 18/378 (5%) Strand=Plus/Plus Query 164604 TAAAATTGTTAATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGT 164663 |||||||||||||||||||||| | |||| ||||| || ||| || || | ||| | Sbjct 4585 TAAAATTGTTAATGGTCCTGAAATTTTGAGTAAATACGTGGGTTCCTCTGAGGAAAATAT 4644 Query 164664 TAGAAAGTTGTTTCAGGAGGCTGAAGAAGAACAAAA---GAAAGCAGGTTTAGCTAGTAA 164720 |||||| |||||| |||| || || | |||| | || ||||| || || ||| Sbjct 4645 TAGAAATTTGTTTAAGGACGCAGAGGCAGAATACAAAGCGAAAGGAGA---AGAAAGTTC 4701 Query 164721 ATTACATGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAA--AAA-------ACGTGG 164771 || ||| |||| |||||||||| | || || | | ||| ||| | | || Sbjct 4702 CTTGCATATTATCATTTTTGATGAATTGGACTCTGTCTTCAAGCAAAGAGGGTCAAGAGG 4761 Query 164772 TGATAATATTATTCATGATG-CAGTG--GTTAATCAGTTGCTTTCTAAAATAGATGGTGT 164828 |||| || | || || || || || ||||| ||| | | ||||| |||||||| Sbjct 4762 TGATGGTACTGGGGTTGGTGACAATGTTGTCAATCAATTGTTAGCCAAAATGGATGGTGT 4821 Query 164829 AGAATCCTTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGA 164888 || ||||| || ||||| || | ||||||||||| || ||||| || ||| | Sbjct 4822 TGATCAGTTAAACAACATTTTGGTTATTGGTATGACCAATCGTAGAGATTTGATCGATAA 4881 Query 164889 TGCTTTATTACGACCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGA 164948 || ||||| |||||||| |||| ||| | || | ||||| || || || |||| Sbjct 4882 CGCGTTATTGAGACCTGGTAGATTTGAAGTTCAAGTGGAAATCAAGTTGCCAGATGAAGA 4941 Query 164949 AGGACGCCTTCAAATTTT 164966 ||| | || |||||||| Sbjct 4942 AGGTAGACTACAAATTTT 4959 >seq124 Length=28590 Score = 105 bits (116), Expect = 8e-18 Identities = 294/448 (66%), Gaps = 21/448 (5%) Strand=Plus/Plus Query 6807 TAATTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATG 6866 || ||||||||| | ||| | | |||||| ||||| ||||| || || | || || Sbjct 21849 TATTTGTTCTTTCAAAGCGTCAACGTGATCTTTATAAACGTGAGCGTCCCCCAAAGTGTG 21908 Query 6867 AATAAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATA 6926 ||||||||||| || | ||||||| | ||| ||||| | | || || |||||||| Sbjct 21909 GATAAATTCACCAGGATCCATATCACAAACTTTGGCAATCATCTTGGTCAACAATGCATA 21968 Query 6927 AGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATA-ACATTG-A 6984 || || | || || || || ||||| ||||| || |||||||| || | | | | Sbjct 21969 GGATGCGATGTTGAATGGAACTCCTAAACCCATGTCGCAGGATCTTTGGTATAGAACGCA 22028 Query 6985 C--AAGATAA--AATATTGTCTA------TAG---------CATAAAATTGACACAATAC 7025 | ||| | | | | | || ||| |||||||||||| || || Sbjct 22029 CGAAAGTTTAGGACGAGCGCCTTCCTCCTTAGGAAAACTCACATAAAATTGACTGAAGAC 22088 Query 7026 ATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAAT 7085 |||||| || || ||| | | | | ||| | |||||||||||| | | | ||| Sbjct 22089 ATGACAAGGTGGCAAAGCCATTTTTTTGAAATCTGGAGGATTCCAAGCACTTAAGATAAT 22148 Query 7086 ACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATACC 7145 | ||| || | || || ||| | ||| ||| | | | |||||| || Sbjct 22149 TCTTCTGTCGTAAGGGTTATGTTTCAGTTTATATATGACTTCAGCGAGTTGATCGTAGCC 22208 Query 7146 CTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAA 7205 ||| || ||||| || | ||| | | || | ||||||||||||||||| ||||| Sbjct 22209 CTGGCCATCATAGTTGTCGTCACATGTCTTGTATTCTGCTCCAAAATGTCTCCACTGAAA 22268 Query 7206 CCCATAAATAGGACCTAAATCACCTTCT 7233 |||||||| |||||| | |||||||||| Sbjct 22269 CCCATAAACAGGACCAAGATCACCTTCT 22296 >seq167 Length=9363 Score = 93.3 bits (102), Expect = 5e-14 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 19328 GTTAAAATTAAATTAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTT 19387 |||||| ||| | | ||| || | ||| | || |||| ||||| |||||||| || Sbjct 3094 GTTAAAGTTAGAGTTAGAACTACCAAAGTGCCGCAAATTGGTGACAAGTTTGCCTCCAGA 3035 Query 19388 ACTGCTCAAAAAGGCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAA 19447 | ||||||||| || |||||| | ||| | |||||||||||| ||||| | Sbjct 3034 CACGGTCAAAAAGGTACCATTGGTATCACATATAGAAGAGAAGATATGCCATTTACGGCA 2975 Query 19448 GATGGTATAGTGCCGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503 || ||||| || || ||| | || || |||||||| ||| ||||| ||| ||||| Sbjct 2974 GAAGGTATTGTTCCTGATTTGATCATCAACCCACACGCTATTCCATCTCGTATGAC 2919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595869728238000