Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq140 279 5e-70
>seq140
Length=127049
Score = 279 bits (308), Expect = 5e-70
Identities = 630/938 (67%), Gaps = 25/938 (3%)
Strand=Plus/Plus
Query 21166 TTTTGACATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTT 21225
||||| ||||| || ||||||||||||| |||||||||||| || ||||| || ||
Sbjct 6232 TTTTGCCATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTT 6291
Query 21226 TCCTTCCAATGATATAGATTCCATAAAATCAAATGGATTTTCAGATTTA-AATATTTTAT 21284
||| | ||||| ||| |||||||||||||||||||||| | ||| |||||||| |
Sbjct 6292 ACCTGCTAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTT-T 6350
Query 21285 TACAACCCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATT 21344
| ||| | | | ||||||||||| || |||||||| | ||||||| ||| |||
Sbjct 6351 CATTACCTAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATG 6410
Query 21345 CACAATTCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTT-CTATA 21403
|| ||||||||| | || ||||| | || | | |||||| | ||||| | |||
Sbjct 6411 CAGCATTCATACCTAATAAAGAAACAGGCAATGCATCT-TCAAAATATCTTTTTTCAATA 6469
Query 21404 GAGACGGCTTCAACAATTATATTTATTATCCTAGATGTACTAGG----GGGATACAAT-- 21457
|| || |||||| ||| || || || ||| | | || || || |
Sbjct 6470 GAAACAGCTTCAGTAATAATTCTT----TCAGCGATTT--TTGGATCTGGTTTATTTTCC 6523
Query 21458 AATTGTTTAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAAT 21517
|| |||| ||| | | ||||||||||||| || | |||||||| |||| || |||
Sbjct 6524 AAATGTTGAAATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAAT 6583
Query 21518 TCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCA 21577
||||| ||||| || ||||| ||||| || || | || ||||||||||| |||| |||
Sbjct 6584 TCATTTGAAAAAGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCA 6643
Query 21578 AATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTAT 21637
|||| || |||||||||| || ||||| ||||||||||| || |||| |||| | ||
Sbjct 6644 AATGAACCGGAAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAAT 6703
Query 21638 GTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCA 21697
| |||| ||| |||||| | ||||||| || |||||||| || |
Sbjct 6704 AATGCATCTTCATCTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGA 6763
Query 21698 ATTGTATCAATAGCTTTTAA-AAGATGAtt-tttttCATCTACATCGGTTATGNNNNNNN 21755
|| || |||||||| || || |||| ||| |||| | | ||| | ||
Sbjct 6764 ATAGTTTCAATAGCATTGAACAAGA--ATTCACTTTCTTTTGGATCTTTGATATAAGTAT 6821
Query 21756 NNNNNNNNNNACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAA 21815
||| ||||| ||| |||||||| ||| || || || |||||||
Sbjct 6822 CGATCAAAAGCGAATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAA 6881
Query 21816 AACATCTTGCCTCTGAACATTGAACCTC-GGAATAAAATCGTTGAGCCAAGTTTTCATTT 21874
||||| | || |||| | || || || | | | |||| | | |||| || |||||
Sbjct 6882 AACATTTAGCTTCTGGAATCTGCACTTCAGCACTGAAATTCTCCA-CCAAATTCTCATTG 6940
Query 21875 ACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTA 21934
|| || ||||| || || |||||||| || | | | || ||| ||| ||| ||
Sbjct 6941 ACAATCCCATCTGAAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTT 7000
Query 21935 TCTGTTAAT---TTTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTC 21991
|| | | | || ||||| || | |||||| || | ||| | |||||| | |||
Sbjct 7001 TCATTCATTCTATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTC 7060
Query 21992 CAAAAGCTAGCAATAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAAT 22051
||||| ||| ||| ||| || |||||| |||| ||| | ||||||||
Sbjct 7061 CAAAATGAAGCTTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAAC 7120
Query 22052 ATTACAAACCTGTTATTTGATTCAACTAAAAGTGGTTC 22089
| ||||| || | || ||| || || || |||||
Sbjct 7121 AAAACAAATCTTCTTTTGTTTTCCACCAATAGCGGTTC 7158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531898772128200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |