Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq140 279 5e-70 >seq140 Length=127049 Score = 279 bits (308), Expect = 5e-70 Identities = 630/938 (67%), Gaps = 25/938 (3%) Strand=Plus/Plus Query 21166 TTTTGACATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTT 21225 ||||| ||||| || ||||||||||||| |||||||||||| || ||||| || || Sbjct 6232 TTTTGCCATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTT 6291 Query 21226 TCCTTCCAATGATATAGATTCCATAAAATCAAATGGATTTTCAGATTTA-AATATTTTAT 21284 ||| | ||||| ||| |||||||||||||||||||||| | ||| |||||||| | Sbjct 6292 ACCTGCTAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTT-T 6350 Query 21285 TACAACCCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATT 21344 | ||| | | | ||||||||||| || |||||||| | ||||||| ||| ||| Sbjct 6351 CATTACCTAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATG 6410 Query 21345 CACAATTCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTT-CTATA 21403 || ||||||||| | || ||||| | || | | |||||| | ||||| | ||| Sbjct 6411 CAGCATTCATACCTAATAAAGAAACAGGCAATGCATCT-TCAAAATATCTTTTTTCAATA 6469 Query 21404 GAGACGGCTTCAACAATTATATTTATTATCCTAGATGTACTAGG----GGGATACAAT-- 21457 || || |||||| ||| || || || ||| | | || || || | Sbjct 6470 GAAACAGCTTCAGTAATAATTCTT----TCAGCGATTT--TTGGATCTGGTTTATTTTCC 6523 Query 21458 AATTGTTTAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAAT 21517 || |||| ||| | | ||||||||||||| || | |||||||| |||| || ||| Sbjct 6524 AAATGTTGAAATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAAT 6583 Query 21518 TCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCA 21577 ||||| ||||| || ||||| ||||| || || | || ||||||||||| |||| ||| Sbjct 6584 TCATTTGAAAAAGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCA 6643 Query 21578 AATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTAT 21637 |||| || |||||||||| || ||||| ||||||||||| || |||| |||| | || Sbjct 6644 AATGAACCGGAAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAAT 6703 Query 21638 GTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCA 21697 | |||| ||| |||||| | ||||||| || |||||||| || | Sbjct 6704 AATGCATCTTCATCTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGA 6763 Query 21698 ATTGTATCAATAGCTTTTAA-AAGATGAtt-tttttCATCTACATCGGTTATGNNNNNNN 21755 || || |||||||| || || |||| ||| |||| | | ||| | || Sbjct 6764 ATAGTTTCAATAGCATTGAACAAGA--ATTCACTTTCTTTTGGATCTTTGATATAAGTAT 6821 Query 21756 NNNNNNNNNNACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAA 21815 ||| ||||| ||| |||||||| ||| || || || ||||||| Sbjct 6822 CGATCAAAAGCGAATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAA 6881 Query 21816 AACATCTTGCCTCTGAACATTGAACCTC-GGAATAAAATCGTTGAGCCAAGTTTTCATTT 21874 ||||| | || |||| | || || || | | | |||| | | |||| || ||||| Sbjct 6882 AACATTTAGCTTCTGGAATCTGCACTTCAGCACTGAAATTCTCCA-CCAAATTCTCATTG 6940 Query 21875 ACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTA 21934 || || ||||| || || |||||||| || | | | || ||| ||| ||| || Sbjct 6941 ACAATCCCATCTGAAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTT 7000 Query 21935 TCTGTTAAT---TTTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTC 21991 || | | | || ||||| || | |||||| || | ||| | |||||| | ||| Sbjct 7001 TCATTCATTCTATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTC 7060 Query 21992 CAAAAGCTAGCAATAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAAT 22051 ||||| ||| ||| ||| || |||||| |||| ||| | |||||||| Sbjct 7061 CAAAATGAAGCTTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAAC 7120 Query 22052 ATTACAAACCTGTTATTTGATTCAACTAAAAGTGGTTC 22089 | ||||| || | || ||| || || || ||||| Sbjct 7121 AAAACAAATCTTCTTTTGTTTTCCACCAATAGCGGTTC 7158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531898772128200