Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq230 132 5e-26
seq70 122 8e-23
seq182 113 4e-20
>seq230
Length=21327
Score = 132 bits (146), Expect = 5e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837
||||| ||||| |||||||| || | ||||| | ||| | ||||| ||||||||||
Sbjct 13448 TTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCATC 13507
Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897
|| | |||||| || || ||||||||||| || || || || ||||||||| |
Sbjct 13508 GATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 13567
Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957
|| | | || |||||| | ||||||| ||||| | ||||| ||||||||||||
Sbjct 13568 ATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 13627
Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| ||| | || ||||| ||||| | ||||| ||
Sbjct 13628 GAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 13665
>seq70
Length=20209
Score = 122 bits (134), Expect = 8e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825
||||||||| | ||||| ||||| || ||||| ||| | ||||| | ||| | |||||
Sbjct 19807 AAAATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCC 19748
Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885
||||||||||| | ||||| ||||| |||||||||||||| || || ||
Sbjct 19747 TCAGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGAC 19688
Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945
||||||||| | |||| | || ||||| | ||||| | |||| | ||||||
Sbjct 19687 CAACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCGACTAC 19628
Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| ||||| || || || |||| |||| ||||| | ||||| ||
Sbjct 19627 AACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 19578
>seq182
Length=55006
Score = 113 bits (124), Expect = 4e-20
Identities = 164/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 26764 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAAT 26823
|||| |||||| | || || ||||| || || || ||| | || ||| | ||| | ||||
Sbjct 1661 ACAAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAAT 1720
Query 26824 CAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCG 26883
| |||||||| || | || ||| || || ||||||||||| || || || |
Sbjct 1721 CCTCTGACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTG 1780
Query 26884 ATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACT 26943
| ||||||||| | || | | || |||||| | ||||||| ||||| | ||||
Sbjct 1781 ACCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACT 1840
Query 26944 ATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
| ||||||||||||||||| || | || |||| ||||| | ||||| ||
Sbjct 1841 ACAACATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGG 1892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478660575099600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |