Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq140 224 3e-53
seq82 159 9e-34
seq124 87.8 5e-12
>seq140
Length=127049
Score = 224 bits (248), Expect = 3e-53
Identities = 539/805 (67%), Gaps = 24/805 (3%)
Strand=Plus/Minus
Query 22214 TTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTG 22273
|| ||||||| || ||| | |||| || || || ||||||| | ||| |||||
Sbjct 6974 TTTTAGCATTTTTCGCTGCTTCAGATGGGATTGTCAATGAGAATTTGGTGGAGAATTTCA 6915
Query 22274 CATCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAA 22333
||||| | || ||||| || | |||||| || || | ||||| ||||| ||||
Sbjct 6914 GTGCTGAAGTGCAGATTCCAGAAGCTAAATGTTTTTACGGGTTCCAAATCATGATGGAAA 6855
Query 22334 ATGTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAG--AAGATAAAGACGA 22391
|| | || ||||||||||| | || | | ||| || ||||| | | ||
Sbjct 6854 ATATCCATAGTGAAACATATTCGCTTTTGATCGAT--ACTTATATCAAAGATCCAAAAGA 6797
Query 22392 ACAACGAAA-CTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATT 22450
| | ||| ||| ||| || ||| || |||| | ||| || | || || || |
Sbjct 6796 A-AGTGAATTCTTGTTCAATGCTATTGAAACTATTCCACAAATCAAAGAAAAAGCTGAAT 6738
Query 22451 GGGCGCTGAAATGGATGAACAATGAACGTTCATTC---GCGGAACGTCTTATTGCATTTG 22507
|||| | | |||||| | ||||| | |||| || ||| | | | |||||||
Sbjct 6737 GGGCTATTAGATGGATTCAAGATGAAGATGCATTATTTGCTGAAAGATTGGTGGCATTTG 6678
Query 22508 CTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaC 22567
||| |||||||| |||||||||| || ||||| |||||| |||||| |||| |||
Sbjct 6677 CTGCTGTTGAAGGTGTTTTCTTTTCCGGTTCATTTGCTGCAATTTTTTGGTTAAAGAAAA 6618
Query 22568 GTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTC 22627
| | ||||| ||| | || ||||||||||| || ||| | ||||||| || || |
Sbjct 6617 AGGGGTTGATGCCAGGTTTGACTTTTTCAAATGAATTGATTTGTAGAGATGAAGGGCTAC 6558
Query 22628 ATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACT---TCCATATG 22684
| || |||||||| ||| | ||| || | ||| | |||||| |||| |
Sbjct 6557 ACACTGATTTTGCATGTCTATTATTTC---AACATTTGGAAAATAAACCAGATCCAAAAA 6501
Query 22685 AAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGG 22744
||| | || |||||||| | || ||| ||||| || | || || |
Sbjct 6500 TCGCTGAAA--GA-ATTATTACTGAAGCTGTTTCTATTGAAAAAAGATATTTTGAAGATG 6444
Query 22745 CGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTG 22804
| || || || | | | ||||| ||||| | || |||| | |||| || ||||||
Sbjct 6443 CATTGCCTGTTTCTTTATTAGGTATGAATGCTGCATTGATGAATCAATATGTTGAATTTG 6384
Query 22805 TTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCAT 22864
|||| ||| | |||| || || | ||| ||| ||| ||||||| || |||||||
Sbjct 6383 TTGCTGATAGATTATTGGTTGCATTAGGTAATGAAAAATATTATAATGTTTCAAATCCAT 6324
Query 22865 TTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTTG 22924
|||| | |||||| ||||||| | | ||| || ||||||||||| ||||||||||||
Sbjct 6323 TTGATTTTATGGAAAATATTTCATTAGCAGGTAAAACCAATTTCTTTGAAAAAAGAGTTT 6264
Query 22925 GTGAATACCAAAAAGCAGGTGTTATGG---ATGCATTGAAT---GATAGTTCAAAACACG 22978
||| || ||||||||||||||||||| | || ||| || ||| || || |
Sbjct 6263 CTGATTATCAAAAAGCAGGTGTTATGGCAAAATCAAGTAATACAGAAAGTGCAGAAGGTG 6204
Query 22979 GATTTACATTAGATGAAGAATTTTA 23003
||||| || |||||||| |||||
Sbjct 6203 CTTTTACCTTTGATGAAGATTTTTA 6179
>seq82
Length=13639
Score = 159 bits (176), Expect = 9e-34
Identities = 543/836 (65%), Gaps = 14/836 (2%)
Strand=Plus/Minus
Query 363363 TTATGAGAAGGATCTCGAGTATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCT 363422
|||||| | ||| || | ||| || ||| || | || || |||| | ||| || |
Sbjct 13043 TTATGATAGAGATTTCCAATATAATTATTTTGGTTTCAAAACATTGGAAAGATCGTATTT 12984
Query 363423 ATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTAT 363482
|| | |||||||| | |||| |||| | || || ||| || | ||| | |||||| |
Sbjct 12983 ATTAAGAATCAATGGACAAATTGCTGAAAGACCTCAACATTTGATCATGAGAGTTGCTGT 12924
Query 363483 TGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCG 363542
|| || ||| | | ||| |||| | | ||||| ||||| || | || | |
Sbjct 12923 CGGGATTCATGGTTCAGATATTGAAAAAGTCTTGGAAACTTATAA--TTTGATGTCTTTG 12866
Query 363543 TG-TATT-CACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATG 363600
| |||| ||| || || | ||||| | | |||||||||||| | | || || |||
Sbjct 12865 AGATATTTCACACATGCATCTCCAACTTTATTCAATGCTGGAACACCAAGACCTCAAATG 12806
Query 363601 TCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTT 363660
||||| || || ||| | ||||| ||||||||||| || ||||| | ||| || |
Sbjct 12805 TCTTCATGTTTCCTTGTTGCTATGAAAGACGATTCCATTGATGGTATTTATGATACTTTA 12746
Query 363661 AAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTT 363720
|| | |||||| | ||||| || | ||| || || |||||| | || || ||| ||
Sbjct 12745 AAAGAATGTGCTTTGATTTCTAAAACTGCTGGTGGTATTGGTCTTCATATTCATAATATT 12686
Query 363721 CGTGCA--CAGAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCC 363777
| || | | | ||| ||| || || | |||| || ||||| || ||||
Sbjct 12685 AGATCAACCGGTTC--TTATATTGCAGGTACTAATGGGA-CTTCTAATGGATTGATTCCA 12629
Query 363778 ATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCA 363835
||| || | || || | |||||||| || || || || || ||||| | |||| |
Sbjct 12628 ATGATTAGAGTTTTCAATAATACTGCAAGATATGTTGATCAAGGTGGTAATAAAAGACC- 12570
Query 363836 AAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGC 363895
|| || |||||| | ||| | || || ||| ||||||||||| ||| ||||
Sbjct 12569 -TGGTGCTTTTGCTCTTTATTTAGAACCATGGCATAGTGATATTTTTGATTTTATTGATA 12511
Query 363896 TCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGG 363955
| |||||||| || ||||| ||| | | ||| | ||| |||| |||| | ||||
Sbjct 12510 TTCGGAAAAATCATGGTAAAGAAGAAATTAGAGCAAGAGATTTGTTTCCTGCATTATGGG 12451
Query 363956 TTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCAC 364015
|| | || |||||| | || | | | | ||||| || | |||| |||
Sbjct 12450 TTCCAGATTTATTTATGCAAAAAGTTAAAGAAAATTCAGATTGGACATTGTTTTCTCCAA 12391
Query 364016 ACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGT 364075
||| ||||||| | ||||| | |||| || | || | ||| | | |
Sbjct 12390 GTGAAGCTCCAGGTTTAAGTGATGTTTATGGTGCAGATTTTGAAAAATTGTACAATAGAT 12331
Query 364076 ATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCA 364135
||| || || |||| | | | || || ||| ||||| || |||||| ||| |||
Sbjct 12330 ATGTTTCAGAAGGAAGAGGTAGAAAAACTATTAAAGCACAAAAATTATGGTATGCTATCT 12271
Query 364136 TGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAAC 364191
|||| | || | ||| ||||| ||||| | ||| | ||||||||| | || |||
Sbjct 12270 TGGAAGCACAAACTGAAACAGGTACACCATTTATTGTTTACAAAGATGCTTGTAAC 12215
>seq124
Length=28590
Score = 87.8 bits (96), Expect = 5e-12
Identities = 202/293 (69%), Gaps = 10/293 (3%)
Strand=Plus/Minus
Query 111425 AATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTT--GTCGACAAC 111482
||||||||| |||||||| ||| | || | ||| || |||| ||| || ||||
Sbjct 22356 AATTTGGGAAGGAAATGGGTCAAGAGAGTATCTTGACAAGCTTGG-CTTAAGT-GACAGA 22299
Query 111483 GAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTAC 111542
|||||||||||| || || ||||| || ||||| ||| | || ||||| ||||| |||
Sbjct 22298 AGAGAAGGTGATCTTGGTCCTGTTTATGGGTTTCAGTGGAGACATTTTGGAGCAGAATAC 22239
Query 111543 AAAACCATG-CACGACTCATATGATTCACAGGGAACTGATCAA-TTACAGAATGTCATTG 111600
|| | |||| ||||| |||||| ||||| |||||| | | ||| |||||
Sbjct 22238 AAGA-CATGTGACGACAACTATGATGGCCAGGGCTACGATCAACTCGCTGAA-GTCATAT 22181
Query 111601 ATCAAATTAAGAACAACCC-AACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAAT 111659
|| || | || | ||||| || | | | ||||| | ||||| ||||| ||
Sbjct 22180 ATAAACTGAAACATAACCCTTACGAC-AGAAGAATTATCTTAAGTGCTTGGAATCCTCCA 22122
Query 111660 GCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712
| || |||||||||| | ||||| |||||| | | | || ||||||||
Sbjct 22121 GATTTCAAAAAAATGGCTTTGCCACCTTGTCATGTCTTCAGTCAATTTTATGT 22069
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303348506738510
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |