Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq230 123 2e-23 seq182 122 7e-23 seq70 113 4e-20 >seq230 Length=21327 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 ||||| ||||| |||||||| || | || || | |||||||| || |||||||||| Sbjct 13448 TTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCATC 13507 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || | |||||| || || ||||||||||| || || || || ||||| ||| || Sbjct 13508 GATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 13567 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | | || || ||| | ||||||| |||| | || || |||||||||||| Sbjct 13568 ATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 13627 Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || |||| || || || ||||||||||| || Sbjct 13628 GAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 13665 >seq182 Length=55006 Score = 122 bits (134), Expect = 7e-23 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 23986 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGG 24045 |||| |||||| | || || ||||| || || || ||| | |||||| | |||||||| Sbjct 1661 ACAAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAAT 1720 Query 24046 CCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCG 24105 || |||||||| || | || ||| || || ||||||||||| || || || | Sbjct 1721 CCTCTGACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTG 1780 Query 24106 ATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATT 24165 | ||||| ||| |||| | | || || ||| | ||||||| |||| | || | Sbjct 1781 ACCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACT 1840 Query 24166 ATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 | ||||||||||||||||| || |||| || || || ||||||||||| || Sbjct 1841 ACAACATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGG 1892 >seq70 Length=20209 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 ||||||||| | ||||| ||||| || ||||| ||| | || || | ||||| || || Sbjct 19807 AAAATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCC 19748 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 ||||||||||| | ||||| ||||| ||||||||||| || || || || Sbjct 19747 TCAGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGAC 19688 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 ||||| ||| |||||| | || || || | ||||| | ||||| | ||| || Sbjct 19687 CAACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCGACTAC 19628 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||| || || || | || || || || ||||||||||| || Sbjct 19627 AACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 19578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429934401847275