Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq182 125 6e-24
seq70 111 1e-19
seq230 98.7 8e-16
>seq182
Length=55006
Score = 125 bits (138), Expect = 6e-24
Identities = 168/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|| ||||||||||| || ||||| | || || |||||||||||| | ||| || |||
Sbjct 1663 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCC 1722
Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401
||||| || ||||| || ||| ||||| || |||||||| |||| |||
Sbjct 1723 TCTGACACCATT-GACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTGA 1781
Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461
|| |||||| | || | ||| || |||||||| ||||||| | ||| || | || ||
Sbjct 1782 CCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTA 1841
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||||||||||||| || || | || |||| ||||||||| |||| ||
Sbjct 1842 CAACATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGG 1892
>seq70
Length=20209
Score = 111 bits (122), Expect = 1e-19
Identities = 167/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 115279 ATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA 115338
|| |||||||||||||||||| ||||| | || || |||||||| || | ||| ||
Sbjct 19811 ATAAAAAATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACTTTGGAAGTTGA 19752
Query 115339 GTCCAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCG 115397
||| ||||| | ||||| || || || || || |||||||| | ||
Sbjct 19751 ATCCTCAGACAC-CATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCAC 19693
Query 115398 TTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCG 115457
||| || |||||| | |||| ||| || ||||| || ||||| | || ||| || |||
Sbjct 19692 CTGACCAACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCG 19633
Query 115458 ATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
| || ||||| ||||| ||||| || | || |||| ||||||||| |||| ||
Sbjct 19632 ACTACAACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 19578
>seq230
Length=21327
Score = 98.7 bits (108), Expect = 8e-16
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 115294 TTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGT 115353
|||||||||||| | || || || || || || | ||| || ||| |||||| |
Sbjct 13447 TTTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCAT 13506
Query 115354 TGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACT 115413
| | || ||| ||||| || |||||||| | || ||| || |||||| |
Sbjct 13507 CGATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 13566
Query 115414 TATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAA 115473
|| | ||| || |||||||| ||||||| | ||| || | || || |||||||||||
Sbjct 13567 GATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAA 13626
Query 115474 AGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||| || ||| | || |||| ||||||||| |||| ||
Sbjct 13627 AGAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 13665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425342418916600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |