Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq182 125 6e-24 seq70 111 1e-19 seq230 98.7 8e-16 >seq182 Length=55006 Score = 125 bits (138), Expect = 6e-24 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||||||||||| || ||||| | || || |||||||||||| | ||| || ||| Sbjct 1663 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCC 1722 Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 ||||| || ||||| || ||| ||||| || |||||||| |||| ||| Sbjct 1723 TCTGACACCATT-GACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTGA 1781 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 || |||||| | || | ||| || |||||||| ||||||| | ||| || | || || Sbjct 1782 CCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTA 1841 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||||||||||| || || | || |||| ||||||||| |||| || Sbjct 1842 CAACATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGG 1892 >seq70 Length=20209 Score = 111 bits (122), Expect = 1e-19 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 115279 ATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA 115338 || |||||||||||||||||| ||||| | || || |||||||| || | ||| || Sbjct 19811 ATAAAAAATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACTTTGGAAGTTGA 19752 Query 115339 GTCCAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCG 115397 ||| ||||| | ||||| || || || || || |||||||| | || Sbjct 19751 ATCCTCAGACAC-CATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCAC 19693 Query 115398 TTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCG 115457 ||| || |||||| | |||| ||| || ||||| || ||||| | || ||| || ||| Sbjct 19692 CTGACCAACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCG 19633 Query 115458 ATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 | || ||||| ||||| ||||| || | || |||| ||||||||| |||| || Sbjct 19632 ACTACAACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 19578 >seq230 Length=21327 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 115294 TTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGT 115353 |||||||||||| | || || || || || || | ||| || ||| |||||| | Sbjct 13447 TTTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCAT 13506 Query 115354 TGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACT 115413 | | || ||| ||||| || |||||||| | || ||| || |||||| | Sbjct 13507 CGATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 13566 Query 115414 TATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAA 115473 || | ||| || |||||||| ||||||| | ||| || | || || ||||||||||| Sbjct 13567 GATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAA 13626 Query 115474 AGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| || ||| | || |||| ||||||||| |||| || Sbjct 13627 AGAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 13665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425342418916600