Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq182 93.3 4e-14 seq70 86.0 6e-12 >seq182 Length=55006 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | || || || || | ||| || || |||||||||||||| || | Sbjct 1892 CCACCTCTCAATCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGAC 1833 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | || || | || || || || |||| || | || ||||| || ||| Sbjct 1832 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 1773 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||||||||| |||||| |||| | | | || | || || | ||| |||| Sbjct 1772 ATACCTTCTTTGTCTTGGATTTT-GGCTTTAACATTGTCAATGGTGTCAGAGGATTCGAC 1714 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||||||||| || | |||||| |||||||| ||||| Sbjct 1713 TTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCAT 1666 >seq70 Length=20209 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/235 (68%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | || || || || | ||||||||||||||| |||||||| ||| | Sbjct 19578 CCACCTCTCAATCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGAC 19637 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | ||| || | ||| || || || | || || | || ||||| || || Sbjct 19638 AACGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGA 19697 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||||||||| ||| || ||||| | || | || || | ||| || | Sbjct 19698 ATCCCTTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACT 19757 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACTTATT 131242 || | || | |||||| || || | |||||| || ||||| ||||| ||||| Sbjct 19758 TCCAAAGTGATGGTTTTCCCAGTCAAAGTTTTAACAAAAATTTGCATTTTTTATT 19812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011000451200