Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq70 111 1e-19
seq182 89.7 4e-13
>seq70
Length=20209
Score = 111 bits (122), Expect = 1e-19
Identities = 157/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
|||| |||| || || || ||||||||||| ||||||||||||| || ||| || ||
Sbjct 19590 CTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCCG 19649
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
|| ||||| ||||| || ||| |||| | | |||||||| || | || ||||||
Sbjct 19650 TCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTG 19709
Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || | ||| || | | | | ||||| || || ||||| ||||||
Sbjct 19710 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAAGTGATG 19769
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGTA 16941
||||| || |||| ||||| |||||||| |||||||| ||
Sbjct 19770 GTTTTCCCAGTCAAAGTTTTAACAAAAATTTGCATTTTTTA 19810
>seq182
Length=55006
Score = 89.7 bits (98), Expect = 4e-13
Identities = 154/222 (69%), Gaps = 4/222 (2%)
Strand=Plus/Minus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
|||| |||| || || ||||| || ||||| ||||||||||| | || ||| | |
Sbjct 1880 CTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCA 1821
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
|| ||||||||||| || ||| | || | | |||||||| || | || ||||||
Sbjct 1820 TCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTG 1761
Query 16841 TC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGA 16898
|| || || ||| || || | | | | ||||| || || ||||| ||| |
Sbjct 1760 TCTTGGATTTTGGCT--TTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAA 1703
Query 16899 TGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGT 16940
||||||| || |||| ||||| || ||||| ||||| ||||
Sbjct 1702 TGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTTGT 1661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405086494211950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |