Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq70 111 1e-19 seq182 89.7 4e-13 >seq70 Length=20209 Score = 111 bits (122), Expect = 1e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 |||| |||| || || || ||||||||||| ||||||||||||| || ||| || || Sbjct 19590 CTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCCG 19649 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || ||||| ||||| || ||| |||| | | |||||||| || | || |||||| Sbjct 19650 TCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTG 19709 Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || | ||| || | | | | ||||| || || ||||| |||||| Sbjct 19710 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAAGTGATG 19769 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGTA 16941 ||||| || |||| ||||| |||||||| |||||||| || Sbjct 19770 GTTTTCCCAGTCAAAGTTTTAACAAAAATTTGCATTTTTTA 19810 >seq182 Length=55006 Score = 89.7 bits (98), Expect = 4e-13 Identities = 154/222 (69%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 |||| |||| || || ||||| || ||||| ||||||||||| | || ||| | | Sbjct 1880 CTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCA 1821 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || ||||||||||| || ||| | || | | |||||||| || | || |||||| Sbjct 1820 TCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTG 1761 Query 16841 TC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGA 16898 || || || ||| || || | | | | ||||| || || ||||| ||| | Sbjct 1760 TCTTGGATTTTGGCT--TTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAA 1703 Query 16899 TGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGT 16940 ||||||| || |||| ||||| || ||||| ||||| |||| Sbjct 1702 TGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTTGT 1661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405086494211950