Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq82 398 1e-105 seq140 311 1e-79 >seq82 Length=13639 Score = 398 bits (440), Expect = 1e-105 Identities = 1460/2255 (65%), Gaps = 81/2255 (4%) Strand=Plus/Plus Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909 || || || |||| ||| || || | || || | | |||||||| || ||||| | | Sbjct 11184 GTAAACTGGATGGCAGCAGAAGCAGCTTGGGTTCTCAAGTAGTACATCCCTGTTTTCAAA 11243 Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC-TGCTA 61967 || | ||| ||||| |||||||| || ||||| || | || | || | Sbjct 11244 CCTTTAGACCACCCGTAGAAATGCATGGAGGTCAGTTTCCCCATTGTTGGGGCCATG--A 11301 Query 61968 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62027 | |||||||| | ||| ||| |||||| ||||| || ||||| |||||||| | | Sbjct 11302 TGTGGATATTTAGAGAGTGAGATTGATCAATGAAAGCGGATCTGTCAGCAGCCATGTCGA 11361 Query 62028 TAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 62086 | ||||||||||| | | |||||||| ||||| || || || | ||| |||| ||| Sbjct 11362 TGATCGTCTTTTGAGACAATTCCCAAACTGTTTTGTACAAGTCTTTCAAT-TCTTGAGGA 11420 Query 62087 AGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCA 62143 | ||||| | |||||||| || | || || || | || || |||| Sbjct 11421 ATGTTTGGCAAGTGTTGAATGGACCCGTTGTTGGCAATGATGTTTGATTTCATAGCATCG 11480 Query 62144 TTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 62202 ||||| ||| | || ||| |||| || | | ||||| || | ||| ||||| Sbjct 11481 TTCCA-AATGCCCAAATCAACCAAATCTCTTAGCAAGTATGGATTGACAATTTGGAATTC 11539 Query 62203 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATT 62262 |||||||| ||| | || ||| || || || | ||||| | | | || || | Sbjct 11540 ACCAGACAACGTTCTTCTAGAGTACATGTTTGAAGTGAATGGTTCGAAACATTCGTTGTA 11599 Query 62263 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 62322 ||||| ||||| | |||||||| || ||||| || |||| || || ||||| | Sbjct 11600 ACCCAAGATTTGCGATGTTGATGCTGTTGGCATTGGAGCCAATAACAATGAGTTTCTCAA 11659 Query 62323 ACC-GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 62381 || || | | ||||| ||| | | || |||||| | ||| | ||| | || | Sbjct 11660 TCCAGTTTCCACA-ATTTTTTCTCTCAAAGATTCCCATTCCCACAAATCAGTTGGAGCTC 11718 Query 62382 CNNNNNNNNNNNNNNNTTGTAGAATACC--GTTA--CTGGCGTACGATCCTACATATGTA 62437 ||| | || ||| || | |||| | || | | | || Sbjct 11719 TATCCCACATGTCAAATTGCAAAACACCTTGTGAAGCTGGTGAACCTTGGAA-AGAT--- 11774 Query 62438 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 62497 | |||||| ||||| | | | || | ||| | || |||||| | | || | Sbjct 11775 TGGTATGGACCTTCTTCCACGGCCATTTCGTTTGAAGATTCCAATGCAGCATGGTACAAT 11834 Query 62498 GTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAG 62557 |||||||| || | |||| || | || |||| | |||||||||| | || Sbjct 11835 GTTTCGAAAATTTGAATATTCAGTTGTTTGGCTTGTTCGGAATCAAATGGAATTCTCAAA 11894 Query 62558 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 62617 || ||||| | || || || ||||||||||||| | |||||||| |||||| |||| Sbjct 11895 AGCATAAAAGTATCAGCCAAACCTTGAACACCAAGGGCAATAGGTCTGTGTCTCATATTT 11954 Query 62618 GAGATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 62674 ||| || ||| ||| | ||| |||||||| | || || | | | || | |||| Sbjct 11955 GAGTTTCTTGCAGTTTCC---ACAGGGTAATAATTTCTGTCAATGACTCTGTTCAAATTT 12011 Query 62675 CTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---------TCGCCCA 62725 || ||| ||||| | ||||| | | ||| | |||||| | | | ||| Sbjct 12012 CTTGTAATGACTTTTGCAACATCGTGTAATTTTTGGAAATCATAAGTTTGTTGTTGACCA 12071 Query 62726 TCTATTACAAACAT----------GTTCAATGCAACAGATGCCAGATTACAAACGGC--- 62772 ||| | |||||| | ||| |||| ||| |||| ||||||||| || Sbjct 12072 TCTTCTG-AAACATTGATGAAAGCGGGCAAAGCAATAGAAGCCAAATTACAAACAGCAGT 12130 Query 62773 TACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGT 62832 | | || ||| || | ||||| | || ||| || | |||| | ||||| || Sbjct 12131 TTCGTCGTTA---TCTGAATATTCCACAATTTCACAACACAAATTAGATGATTTGATAGT 12187 Query 62833 TCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGT 62892 ||||||||||| ||||||| ||||||||||| ||||| || |||| ||| ||||| || Sbjct 12188 TCCTAAATTTTTTTGATTAGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGT 12247 Query 62893 ACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGA 62952 ||| |||||| | || | ||| | || || | ||| | | | || |||| |||| Sbjct 12248 ACCTGTTTCAGTTTGTGCTTCCAAGATAGCATACCATAATTTTTGTGC-TTTA--ATAGT 12304 Query 62953 TTTG-TATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCA 63009 ||| || ||||| |||| | ||| | |||||| ||| || || | || | Sbjct 12305 TTTTCTACCTCTTCCTTCTGAAACATATCTATTGTACAATTTTTCAAAATCTGCACCATA 12364 Query 63010 AACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTT 63069 ||||| | || ||| |||| ||| | | ||| | ||| ||| | || || Sbjct 12365 AACATCACTTAAACCTGGAGCTTCACTTGGAGAAAACAATGTCCAATCTGAATTTTCTTT 12424 Query 63070 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 63129 ||| || |||||| | ||| |||| ||| | || ||| | |||||| | |||| Sbjct 12425 AACTTTTTGCATAAATAAATCTGGAACCCATAATGCAGGAAACAAATCTCTTGCTCTAAT 12484 Query 63130 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63189 ||| || || || ||| || || ||| | || | | ||||||| |||||| || Sbjct 12485 TTCTTCTTTACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATGCCATGG 12544 Query 63190 TTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 63249 ||| || || | || | | | ||||| | ||| || || || ||||| | ||||| || Sbjct 12545 TTCTAAATAAAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTTGC 12604 Query 63250 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGA 63309 || ||||| ||||||| | ||||||||| | ||||| || || ||||| || |||| Sbjct 12605 AGTATTATTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTCCCATTAGTACCTGC 12664 Query 63310 GATATAGCTTCCACTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTT 63368 ||||| || | | | ||||||| ||| ||| ||||| || || || || ||| Sbjct 12665 AATATAAGAACCGGTTGATCTAATATTATGAATATGA-AGACCAATACCACCAGCAGTTT 12723 Query 63369 TAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCA 63428 |||| || || || ||| |||||| |||||||| || || || || ||| || ||| Sbjct 12724 TAGAAATCAAAGCACATTCTTTTAAAGTATCATAAATACCATCAATGGAATCGTCTTTCA 12783 Query 63429 TGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAG 63488 | || || ||||| ||||||||| | | ||||| ||||| ||||| || | Sbjct 12784 TAGCAACAAGGAAACATGAAGACATTTGAGGTCTTGGTGTTCCAGCATTGAATAAAGTTG 12843 Query 63489 GAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTA 63548 |||| || || || || || | ||| | | ||| || || || | || || | Sbjct 12844 GAGATGCATGTGTGAAATATCTCAAAGACATCAAATTATAAGTTTCCAAGACTTTTTCAA 12903 Query 63549 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 63608 |||| | |||||| || || || || | ||| | || || |||||||||||| | | Sbjct 12904 TATCTGAACCATGAATCCCGACAGCAACTCTCATGATCAAATGTTGAGGTCTTTCAGCAA 12963 Query 63609 TCTTGT-TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 63667 | |||| || ||| | || || || ||| ||||||| ||||| ||||||||||| || Sbjct 12964 T-TTGTCCATTGATTCTTAATAAATACGATCTTTCCAATGTTTTGAAACCAAAATAATTA 13022 Query 63668 TATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACT 63727 ||| || |||| || |||| |||| | || | ||| |||| ||| | || Sbjct 13023 TATTGGAAATCTCTATCATAAACAATAGCACTATTTAAAACATCTTTATTTTTTT---CT 13079 Query 63728 ACATCCATGGTAATACTTGA-----AATAATAGGAAAATGTTTCCCATTTTTAGGATTGA 63782 ||| || ||| || | | ||| || ||| | | | |||||||| ||| | Sbjct 13080 ACA-ATTTGATAA-ACGTCATCACTAATCATTGGAGATTTTAATCCATTTTTTTCATTAA 13137 Query 63783 CATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGAT 63842 |||| ||||||| || |||| | |||| ||||||| |||| ||| |||| || Sbjct 13138 CATAAAAATATAAATCTGAAATGACTTGAGAAAATTGTTTTTTAGTTTGTTTATGTAAAT 13197 Query 63843 TTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG--TTGT-GTAGTACAAG 63899 | || | || ||||| || || | | |||||||| ||||| | || || || || Sbjct 13198 TAGAAATAGCAATTCTTGCAGCCAATGTAGCATAATCAGGATGAATAGTGGTCATATAA- 13256 Query 63900 TGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATATTC 63959 || | |||| || |||| | | |||||||| | || || ||||| | ||| | | Sbjct 13257 --GCACATGTTTCAGCAGCCAAATTATCCAATTCAATAGTAGTAACACCTTCATAAACAC 13314 Query 63960 CTTGGATAA-CCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAA 64018 | |||| ||| | | || || |||||| ||||| | | | ||| |||||| Sbjct 13315 CAGATATAATTCTTTGT-GTAATAGAAACAGGATCAATATGGTTTGGATCTAAACCATAA 13373 Query 64019 CATAATTTTCTAATACGAGATGTGATTTTATCAAA 64053 |||||| | ||| | ||| |||||||||||||| Sbjct 13374 CATAATCTAGCAATTCTAGAAGTGATTTTATCAAA 13408 >seq140 Length=127049 Score = 311 bits (344), Expect = 1e-79 Identities = 612/899 (68%), Gaps = 16/899 (2%) Strand=Plus/Plus Query 32357 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 32416 |||||| || |||||| || ||| || | |||||| || ||||| ||||||||| | Sbjct 6238 CATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGC 6297 Query 32417 TAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCC 32476 |||||| ||||||||||| ||||| |||||||| | |||||||||| ||||| | || Sbjct 6298 TAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCATTACC 6357 Query 32477 CAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATT 32536 ||| || | |||||||| || |||||||| | |||| ||||||| | || ||| Sbjct 6358 TAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATT 6417 Query 32537 CATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGC 32596 ||| |||| | ||| || | || | || | || || ||||||||| || || Sbjct 6418 CATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACAGC 6477 Query 32597 GTCTGTTATAATAGATCTTACTGT--TTCTTCACTC-GGTGGATACAATAAATGTTTAAA 32653 || || ||||| |||| | | || || || ||| || ||||||| ||| Sbjct 6478 TTCAGTAATAAT---TCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAA 6534 Query 32654 CATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAA 32713 | | |||||| ||||| |||||| || || ||||||| ||| ||||| || ||||| Sbjct 6535 TAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAA 6594 Query 32714 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGA 32773 || | || ||||| | || || || | |||||| || | |||||||| || || Sbjct 6595 AGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGA 6654 Query 32774 AAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTC 32833 |||||||| ||||| || || ||||| || | | ||| || || | || || Sbjct 6655 AAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTC 6714 Query 32834 ATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 32890 || | ||||| | |||||| || || || | ||| | || || || || || Sbjct 6715 ATCTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAAT 6774 Query 32891 AGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACT 32950 |||||| || | | | |||| || |||||| | ||| ||||| |||||||| Sbjct 6775 AGCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGCGA 6834 Query 32951 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTC 33010 ||| |||| ||| || ||||| || ||||| || ||||| || ||| |||| || Sbjct 6835 ATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTC 6894 Query 33011 GGTAATCTGTACTTCTGTAC--AAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCA 33068 | |||||| ||||| | || ||| || || | ||||| ||||| || || || || Sbjct 6895 TGGAATCTGCACTTCAGCACTGAAATTC--TCCACCAAATTCTCATTGACAATCCCATCT 6952 Query 33069 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT--- 33125 || || ||||| || || || | || ||| || |||| | | | | | Sbjct 6953 GAAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTA 7012 Query 33126 TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 33185 |||||||| || | ||||||||| || | ||| | |||||| | ||||||||||| || Sbjct 7013 TTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGCT 7072 Query 33186 TCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 33244 || || ||| || | |||||| ||||| |||| |||||||| | ||||||||| Sbjct 7073 TCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATCT 7131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633629584278000