Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq140 282 5e-71 >seq140 Length=127049 Score = 282 bits (312), Expect = 5e-71 Identities = 613/900 (68%), Gaps = 23/900 (3%) Strand=Plus/Plus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||||||||| |||||| || || |||| |||||||||||||||| || || ||| | Sbjct 6238 CATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGC 6297 Query 92850 CAAAGATATCGAATTCACTAGTG--ATTGGATTCTTGGCGTTATAATACTTTTCACCGAT 92907 || || || | || | | |||||| | |||||||| |||||| Sbjct 6298 TAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCATTACC 6357 Query 92908 CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATT 92967 || | ||||||||||||||| |||||||| | || ||| |||||| || ||| Sbjct 6358 TAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATT 6417 Query 92968 CATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAA-CGG 93026 ||| |||| | | ||||| | || || |||| | |||||| | | || || | | Sbjct 6418 CATACCTAATAAAGAAACAGGCAATGCATCT-TCAAAATATCTTTTTTCAATAGAAACAG 6476 Query 93027 CTTCTTTCAAGATTTCTATTACTCTACTATTTGG---TGGTTTTTGTACGACATAATTGT 93083 |||| | || | |||| | | | | | ||||| |||||| | | | | || | Sbjct 6477 CTTCAGT-AATAATTCTTTCAG-CGATT-TTTGGATCTGGTTTATTTTCCAAATGTTGAA 6533 Query 93084 ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGA 93143 | | || || ||||| || || |||| ||||| |||| | ||||| ||||| | Sbjct 6534 ATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAA 6593 Query 93144 ATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAG 93203 | || |||||||| | || || |||||| | |||||| |||| |||||| ||| | Sbjct 6594 AAGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGG 6653 Query 93204 aaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAAT 93263 |||| || | |||||| || || ||||||||||| | | ||| ||||| ||| | Sbjct 6654 AAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTT 6713 Query 93264 TACTGCTGA-TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCG 93322 | | ||| ||||| | | |||||| || ||||||| || || || | ||||| Sbjct 6714 CA-TCTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCA 6772 Query 93323 ATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGA 93382 ||||| || || | | | || | || | | |||| || || |||||||| || || Sbjct 6773 ATAGCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGC 6832 Query 93383 GAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCT 93442 ||||| ||||| ||||| ||| ||||| |||||||| ||||| |||||| ||||| Sbjct 6833 GAATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCT 6892 Query 93443 TCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCG 93502 || | ||||||||||| | || |||| || | ||| |||||||| || ||||| Sbjct 6893 TCTGGAATCTGCACTTCAGCACTGAAATTCTCCACCAAATTCTCATTGACAATCCCATCT 6952 Query 93503 GATGCTGCaaaaaaaGCCAATA-TATGCT-TTATAAAATGTTTC----TCA-TCATCTTT 93555 || || || ||||| || || | | | || | ||||| |||| ||| |||| | | Sbjct 6953 GAAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCAT-TCT 7011 Query 93556 AAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGA 93615 | |||| ||| ||| | |||||| |||||||||| |||||| |||||||||| || Sbjct 7012 A---TTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGA 7068 Query 93616 TGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 ||||| || |||||| | ||| || || || |||| |||||||| | ||||| Sbjct 7069 AGCTTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAA 7128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556858676968200