Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq140 282 5e-71
>seq140
Length=127049
Score = 282 bits (312), Expect = 5e-71
Identities = 613/900 (68%), Gaps = 23/900 (3%)
Strand=Plus/Plus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
||||||||| |||||| || || |||| |||||||||||||||| || || ||| |
Sbjct 6238 CATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGC 6297
Query 92850 CAAAGATATCGAATTCACTAGTG--ATTGGATTCTTGGCGTTATAATACTTTTCACCGAT 92907
|| || || | || | | |||||| | |||||||| ||||||
Sbjct 6298 TAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCATTACC 6357
Query 92908 CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATT 92967
|| | ||||||||||||||| |||||||| | || ||| |||||| || |||
Sbjct 6358 TAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATT 6417
Query 92968 CATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAA-CGG 93026
||| |||| | | ||||| | || || |||| | |||||| | | || || | |
Sbjct 6418 CATACCTAATAAAGAAACAGGCAATGCATCT-TCAAAATATCTTTTTTCAATAGAAACAG 6476
Query 93027 CTTCTTTCAAGATTTCTATTACTCTACTATTTGG---TGGTTTTTGTACGACATAATTGT 93083
|||| | || | |||| | | | | | ||||| |||||| | | | | || |
Sbjct 6477 CTTCAGT-AATAATTCTTTCAG-CGATT-TTTGGATCTGGTTTATTTTCCAAATGTTGAA 6533
Query 93084 ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGA 93143
| | || || ||||| || || |||| ||||| |||| | ||||| ||||| |
Sbjct 6534 ATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAA 6593
Query 93144 ATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAG 93203
| || |||||||| | || || |||||| | |||||| |||| |||||| ||| |
Sbjct 6594 AAGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGG 6653
Query 93204 aaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAAT 93263
|||| || | |||||| || || ||||||||||| | | ||| ||||| ||| |
Sbjct 6654 AAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTT 6713
Query 93264 TACTGCTGA-TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCG 93322
| | ||| ||||| | | |||||| || ||||||| || || || | |||||
Sbjct 6714 CA-TCTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCA 6772
Query 93323 ATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGA 93382
||||| || || | | | || | || | | |||| || || |||||||| || ||
Sbjct 6773 ATAGCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGC 6832
Query 93383 GAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCT 93442
||||| ||||| ||||| ||| ||||| |||||||| ||||| |||||| |||||
Sbjct 6833 GAATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCT 6892
Query 93443 TCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCG 93502
|| | ||||||||||| | || |||| || | ||| |||||||| || |||||
Sbjct 6893 TCTGGAATCTGCACTTCAGCACTGAAATTCTCCACCAAATTCTCATTGACAATCCCATCT 6952
Query 93503 GATGCTGCaaaaaaaGCCAATA-TATGCT-TTATAAAATGTTTC----TCA-TCATCTTT 93555
|| || || ||||| || || | | | || | ||||| |||| ||| |||| | |
Sbjct 6953 GAAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCAT-TCT 7011
Query 93556 AAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGA 93615
| |||| ||| ||| | |||||| |||||||||| |||||| |||||||||| ||
Sbjct 7012 A---TTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGA 7068
Query 93616 TGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675
||||| || |||||| | ||| || || || |||| |||||||| | |||||
Sbjct 7069 AGCTTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAA 7128
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556858676968200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |