Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq70 183 6e-41
seq182 159 6e-34
seq230 156 8e-33
>seq70
Length=20209
Score = 183 bits (202), Expect = 6e-41
Identities = 169/214 (79%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || || ||||| ||||||||||| || ||||| | || || || ||
Sbjct 19592 CAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCCGTC 19651
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| ||||| || || || || || | |||||||||||| |||||||| ||||| |||||
Sbjct 19652 TTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTGTC 19711
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|| ||||| | ||||||| ||||||||||||| ||||| |||||||| ||||||||
Sbjct 19712 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAAGTGATGGT 19771
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
||| || || | || || || || || ||||||
Sbjct 19772 TTTCCCAGTCAAAGTTTTAACAAAAATTTGCATT 19805
>seq182
Length=55006
Score = 159 bits (176), Expect = 6e-34
Identities = 163/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || ||||| |||||||| ||||| || || || | || || |||||
Sbjct 1878 CAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 1819
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || || || || || || || | |||||||||||| ||||| || ||||| |||||
Sbjct 1818 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTC 1759
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| || || || || || || |||||||| | ||||| ||||||||||| |||||
Sbjct 1758 TTGGATTTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAATGGT 1699
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || || | || || ||||| || |||||
Sbjct 1698 TTTACCTGTCAAAGTTTTAACGAAAATTTGCAT 1666
>seq230
Length=21327
Score = 156 bits (172), Expect = 8e-33
Identities = 157/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || ||||| |||||||| ||||| || || || | || || |||||
Sbjct 13651 CAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 13592
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || || || || || || || | |||||||||||| |||||||| ||||| |||||
Sbjct 13591 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTC 13532
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| || || || |||||| ||||||||||| | ||||| ||||| | ||||| ||
Sbjct 13531 TTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGACTTCTAGAGTGATAGT 13472
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | ||| ||||| ||
Sbjct 13471 CTTACCAGTTAAGGTTTTGACAAA 13448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921618886314600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |