Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq70 183 6e-41 seq182 159 6e-34 seq230 156 8e-33 >seq70 Length=20209 Score = 183 bits (202), Expect = 6e-41 Identities = 169/214 (79%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || || ||||| ||||||||||| || ||||| | || || || || Sbjct 19592 CAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCCGTC 19651 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| ||||| || || || || || | |||||||||||| |||||||| ||||| ||||| Sbjct 19652 TTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTGTC 19711 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || ||||| | ||||||| ||||||||||||| ||||| |||||||| |||||||| Sbjct 19712 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAAGTGATGGT 19771 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||| || || | || || || || || |||||| Sbjct 19772 TTTCCCAGTCAAAGTTTTAACAAAAATTTGCATT 19805 >seq182 Length=55006 Score = 159 bits (176), Expect = 6e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || ||||| |||||||| ||||| || || || | || || ||||| Sbjct 1878 CAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 1819 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || || || || || || || | |||||||||||| ||||| || ||||| ||||| Sbjct 1818 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTC 1759 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| || || || || || || |||||||| | ||||| ||||||||||| ||||| Sbjct 1758 TTGGATTTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAATGGT 1699 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || | || || ||||| || ||||| Sbjct 1698 TTTACCTGTCAAAGTTTTAACGAAAATTTGCAT 1666 >seq230 Length=21327 Score = 156 bits (172), Expect = 8e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || ||||| |||||||| ||||| || || || | || || ||||| Sbjct 13651 CAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 13592 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || || || || || || || | |||||||||||| |||||||| ||||| ||||| Sbjct 13591 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTC 13532 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| || || || |||||| ||||||||||| | ||||| ||||| | ||||| || Sbjct 13531 TTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGACTTCTAGAGTGATAGT 13472 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | ||| ||||| || Sbjct 13471 CTTACCAGTTAAGGTTTTGACAAA 13448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921618886314600