Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq182 116 3e-21 seq70 84.2 2e-11 seq230 82.4 5e-11 >seq182 Length=55006 Score = 116 bits (128), Expect = 3e-21 Identities = 158/219 (72%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||| |||||||| || ||||||| || || || |||||||||||| ||||| ||| | Sbjct 1662 CAAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATC 1721 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGT 21946 | | || || | | | || |||| ||||| || ||||| ||| | ||||| Sbjct 1722 CTCTGACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTG- 1780 Query 21947 AAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGA 22006 ||||||| ||| | ||||||||||| |||||| | |||||| | |||| || | || Sbjct 1781 --ACCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGA 1838 Query 22007 TTACAATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| ||||| || ||||| || ||||| |||| || Sbjct 1839 CTACAACATTCAAAAAGAATCCACCCTTCACTTGGTTTT 1877 >seq70 Length=20209 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 21831 AAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCC 21890 ||||||||||| ||| ||||||| || || || |||||||| || ||||| ||| || Sbjct 19807 AAAATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCC 19748 Query 21891 GCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGG---TGTACCTGTA 21947 |||| || | | | | | ||| || || || ||||| || | ||||| Sbjct 19747 TCAGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTG-- 19690 Query 21948 AACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGAT 22007 ||||||| ||| | || |||||||| ||||| | ||||| | ||| || |||| Sbjct 19689 -ACCAACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCGAC 19631 Query 22008 TACAATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| || || ||||| || || || || |||| || Sbjct 19630 TACAACATCCAAAAGGAGTCGACCCTCCACTTGGTTTT 19593 >seq230 Length=21327 Score = 82.4 bits (90), Expect = 5e-11 Identities = 92/122 (75%), Gaps = 6/122 (5%) Strand=Plus/Plus Query 21927 GATAAAGAGGGTGT---ACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTA 21983 || ||||| ||| | ||||| ||||||| ||| | ||||||||||| |||||| | Sbjct 13532 GACAAAGAAGGTATTCCACCTG---ACCAACAAAGATTGATCTTTGCTGGTAAACAATTG 13588 Query 21984 GAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTA 22043 |||||| | |||| || | || ||||| ||||| || ||||| |||||||| |||| Sbjct 13589 GAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAAGAATCCACTCTTCACTTGGTC 13648 Query 22044 TT 22045 || Sbjct 13649 TT 13650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358123468782970