Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq182 145 6e-30 seq230 114 1e-20 seq70 105 6e-18 >seq182 Length=55006 Score = 145 bits (160), Expect = 6e-30 Identities = 164/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226 ||||||||| || || | || |||||||||||||||||||| || || ||| | | Sbjct 1881 TCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 1822 Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 |||||| | |||||||||||| |||| | | |||||||| || || || |||||||| Sbjct 1821 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTT 1762 Query 114287 GTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCA 114345 ||| || ||| | |||| | | |||| |||||| | ||||||||| |||| ||| | Sbjct 1761 GTCTTGGAT-TTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAA 1703 Query 114346 CCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| || |||| |||||| || ||||| ||||| Sbjct 1702 TGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCAT 1666 >seq230 Length=21327 Score = 114 bits (126), Expect = 1e-20 Identities = 150/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226 |||||| || || || | || |||||||||||||||||||| || || ||| | | Sbjct 13654 TCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 13595 Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 |||||| | |||||||||||| |||| | | |||||||| || ||||| |||||||| Sbjct 13594 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 13535 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 ||| || || ||| | | || | |||||||| ||||||||| || | || | Sbjct 13534 GTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGACTTCTAGAGTGAT 13475 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAA 114374 || || || || | ||||| |||||| Sbjct 13474 AGTCTTACCAGTTAAGGTTTTGACAAAA 13447 >seq70 Length=20209 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226 ||||||||| || || | || || || ||||| |||||||| ||| || || | Sbjct 19589 TCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCC 19648 Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 ||||| | ||||||||||| | || | | |||||||| || ||||| |||||||| Sbjct 19649 GTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTT 19708 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 ||| ||||| || | | || | |||||| | |||||| || |||| || | Sbjct 19709 GTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAAGTGAT 19768 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| || |||| |||||| |||||||| ||||| Sbjct 19769 GGTTTTCCCAGTCAAAGTTTTAACAAAAATTTGCAT 19804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420132838281660