Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq182 145 6e-30
seq230 114 1e-20
seq70 105 6e-18
>seq182
Length=55006
Score = 145 bits (160), Expect = 6e-30
Identities = 164/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226
||||||||| || || | || |||||||||||||||||||| || || ||| | |
Sbjct 1881 TCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 1822
Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286
|||||| | |||||||||||| |||| | | |||||||| || || || ||||||||
Sbjct 1821 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTT 1762
Query 114287 GTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCA 114345
||| || ||| | |||| | | |||| |||||| | ||||||||| |||| ||| |
Sbjct 1761 GTCTTGGAT-TTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAA 1703
Query 114346 CCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
||||| || |||| |||||| || ||||| |||||
Sbjct 1702 TGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCAT 1666
>seq230
Length=21327
Score = 114 bits (126), Expect = 1e-20
Identities = 150/208 (72%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226
|||||| || || || | || |||||||||||||||||||| || || ||| | |
Sbjct 13654 TCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 13595
Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286
|||||| | |||||||||||| |||| | | |||||||| || ||||| ||||||||
Sbjct 13594 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 13535
Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346
||| || || ||| | | || | |||||||| ||||||||| || | || |
Sbjct 13534 GTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGACTTCTAGAGTGAT 13475
Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAA 114374
|| || || || | ||||| ||||||
Sbjct 13474 AGTCTTACCAGTTAAGGTTTTGACAAAA 13447
>seq70
Length=20209
Score = 105 bits (116), Expect = 6e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226
||||||||| || || | || || || ||||| |||||||| ||| || || |
Sbjct 19589 TCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCC 19648
Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286
||||| | ||||||||||| | || | | |||||||| || ||||| ||||||||
Sbjct 19649 GTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTT 19708
Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346
||| ||||| || | | || | |||||| | |||||| || |||| || |
Sbjct 19709 GTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAAGTGAT 19768
Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
||||| || |||| |||||| |||||||| |||||
Sbjct 19769 GGTTTTCCCAGTCAAAGTTTTAACAAAAATTTGCAT 19804
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420132838281660
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |