Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq182 105 7e-18
seq70 100 3e-16
>seq182
Length=55006
Score = 105 bits (116), Expect = 7e-18
Identities = 164/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | |||||| | || | |||| || |||||||||||||||||||| || |
Sbjct 1893 ACCACCTCTCAATCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGA 1834
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | | ||||| | || || || ||| | || | | || ||||| || ||
Sbjct 1833 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 1774
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTA-CAACCTCCACTGTATCACCGGCGTCCA 64394
|| |||||||| ||||| ||||| |||||| || || | || ||| || || |
Sbjct 1773 GATACCTTCTTTGTCTTGGATTTTG-GCTTTAACATTGTCAATGGTGTCAGAGGATTCGA 1715
Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|||| | || | ||| || || ||||||||||| |||||||||||||| ||
Sbjct 1714 CTTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTT 1663
>seq70
Length=20209
Score = 100 bits (110), Expect = 3e-16
Identities = 163/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTG- 64274
||| || | |||||| | || | || | ||||| || ||||| |||||||| || |
Sbjct 19577 ACCACCTCTCAATCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGA 19636
Query 64275 CGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAG 64334
| ||| | || ||||||| | ||| || || ||| |||| | | || ||||| || |
Sbjct 19637 CAACGTTCTGC-CGTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTG 19695
Query 64335 GAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCA 64394
|||| |||||||| || || || || ||| || || | || || || || |
Sbjct 19696 GAATCCCTTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAA 19755
Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|||| | ||| | ||| || || ||||||||||| || ||||||||||||||
Sbjct 19756 CTTCCAAAGTGATGGTTTTCCCAGTCAAAGTTTTAACAAAAATTTGCATTTT 19807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499642895104200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |