Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq82 159 4e-34
>seq82
Length=13639
Score = 159 bits (176), Expect = 4e-34
Identities = 378/570 (66%), Gaps = 22/570 (4%)
Strand=Plus/Plus
Query 116062 TCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATAT 116121
|||||||| ||||| || | | |||||| || ||||| || || | || | | |||
Sbjct 11721 TCCCACATGTCAAATTGCAAAACACCTTGTGAAGCTGGTGAACCTTGGAAAGATTGGTAT 11780
Query 116122 GGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCA 116181
|| || || || | |||| |||| | || | || || || |||| ||| ||
Sbjct 11781 GGACCTTCTTCCACGGCCATTTCGTTTGAAGATTCCAATGCAGCATGGTACAATGTTTCG 11840
Query 116182 AAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAA-- 116239
||||| || ||||| | ||||| | ||||||||||| | || | |||||
Sbjct 11841 AAAATTTGAATATTCAGTTGTTTGGCTTGTTCGGAATCAAATG---GAATTCTCAAAAGC 11897
Query 116240 -TAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 116298
|||| ||| || | |||||| ||||| ||| |||| || | ||||||||||| ||
Sbjct 11898 ATAAAAGTATCAGCCAAACCTTGAACACCAAGGGCAATAGGTCTGTGTCTCATATTTGAG 11957
Query 116299 TTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTG 116358
|||| || || ||||| || ||| |||| || || || || || || | |||| | ||
Sbjct 11958 TTTCTTGCAGTTTCCACAGGGTAATAATTTCTGTCAATGACTCTGTTCAAATTTCTTGTA 12017
Query 116359 ACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACT------GCGAGTCTCTTCA 116412
| || |||| | || || | |||| | ||||| || | || |||||
Sbjct 12018 ATGACTTTTGCAACATCGTGTAATTTTTGGAAATCATAAGTTTGTTGTTGACCATCTTC- 12076
Query 116413 TTGACATACTTAGGAAGG--------GCGATTGACGCCAGATTACACACAGAGGTCTCAT 116464
||| | | | | ||| | || || || |||| |||||| |||| || || |
Sbjct 12077 -TGAAACATTGATGAAAGCGGGCAAAGCAATAGAAGCCAAATTACAAACAGCAGTTTCGT 12135
Query 116465 CCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGT 116524
| ||||| | || || | |||||| ||||||||| || || || || || || |
Sbjct 12136 CGTTATCTGAATATTCCACAATTTCACAACACAAATTAGATGATTTGATAGTTCCTAAAT 12195
Query 116525 TCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCT 116584
| |||||||| || ||| ||||||| ||||| ||||| | ||| |||| || || || |
Sbjct 12196 TTTTTTGATTAGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGTACCTGTTT 12255
Query 116585 CCGTTTGGGACTTGAGAATAGCCTTCCATA 116614
| ||||| | | | ||||| | |||||
Sbjct 12256 CAGTTTGTGCTTCCAAGATAGCATACCATA 12285
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613504861003800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |