Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq82 159 4e-34 >seq82 Length=13639 Score = 159 bits (176), Expect = 4e-34 Identities = 378/570 (66%), Gaps = 22/570 (4%) Strand=Plus/Plus Query 116062 TCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATAT 116121 |||||||| ||||| || | | |||||| || ||||| || || | || | | ||| Sbjct 11721 TCCCACATGTCAAATTGCAAAACACCTTGTGAAGCTGGTGAACCTTGGAAAGATTGGTAT 11780 Query 116122 GGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCA 116181 || || || || | |||| |||| | || | || || || |||| ||| || Sbjct 11781 GGACCTTCTTCCACGGCCATTTCGTTTGAAGATTCCAATGCAGCATGGTACAATGTTTCG 11840 Query 116182 AAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAA-- 116239 ||||| || ||||| | ||||| | ||||||||||| | || | ||||| Sbjct 11841 AAAATTTGAATATTCAGTTGTTTGGCTTGTTCGGAATCAAATG---GAATTCTCAAAAGC 11897 Query 116240 -TAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 116298 |||| ||| || | |||||| ||||| ||| |||| || | ||||||||||| || Sbjct 11898 ATAAAAGTATCAGCCAAACCTTGAACACCAAGGGCAATAGGTCTGTGTCTCATATTTGAG 11957 Query 116299 TTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTG 116358 |||| || || ||||| || ||| |||| || || || || || || | |||| | || Sbjct 11958 TTTCTTGCAGTTTCCACAGGGTAATAATTTCTGTCAATGACTCTGTTCAAATTTCTTGTA 12017 Query 116359 ACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACT------GCGAGTCTCTTCA 116412 | || |||| | || || | |||| | ||||| || | || ||||| Sbjct 12018 ATGACTTTTGCAACATCGTGTAATTTTTGGAAATCATAAGTTTGTTGTTGACCATCTTC- 12076 Query 116413 TTGACATACTTAGGAAGG--------GCGATTGACGCCAGATTACACACAGAGGTCTCAT 116464 ||| | | | | ||| | || || || |||| |||||| |||| || || | Sbjct 12077 -TGAAACATTGATGAAAGCGGGCAAAGCAATAGAAGCCAAATTACAAACAGCAGTTTCGT 12135 Query 116465 CCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGT 116524 | ||||| | || || | |||||| ||||||||| || || || || || || | Sbjct 12136 CGTTATCTGAATATTCCACAATTTCACAACACAAATTAGATGATTTGATAGTTCCTAAAT 12195 Query 116525 TCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCT 116584 | |||||||| || ||| ||||||| ||||| ||||| | ||| |||| || || || | Sbjct 12196 TTTTTTGATTAGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGTACCTGTTT 12255 Query 116585 CCGTTTGGGACTTGAGAATAGCCTTCCATA 116614 | ||||| | | | ||||| | ||||| Sbjct 12256 CAGTTTGTGCTTCCAAGATAGCATACCATA 12285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613504861003800