Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq70 141 2e-28
seq230 113 1e-19
seq182 100 7e-16
>seq70
Length=20209
Score = 141 bits (156), Expect = 2e-28
Identities = 165/222 (74%), Gaps = 3/222 (1%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | |||||| |||||||||||||||| ||||||||| | ||| || || ||
Sbjct 19589 TCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCC 19648
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||| ||| || || || || || | | || ||||| || ||| ||||||
Sbjct 19649 GTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTT 19708
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| ||||| ||| ||| |||| |||||||| | ||| || ||||| |||||
Sbjct 19709 GTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAAGTGAT 19768
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
|| || || || | |||||| ||||||||||| ||||||
Sbjct 19769 GGTTTTCCCAGTCAAAGTTTTAACAAAAATTTG---CATTTT 19807
>seq230
Length=21327
Score = 113 bits (124), Expect = 1e-19
Identities = 152/209 (73%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| ||||| || || ||||| | ||||||||||| |||||| || ||
Sbjct 13654 TCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 13595
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||||| || || || || ||||| | | || ||||| || ||| ||||||
Sbjct 13594 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 13535
Query 199534 CTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGA 199592
|| || || ||| || || ||| |||| |||||| | | ||| || || | ||||
Sbjct 13534 GTCTTGGAT-TTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGACTTCTAGAGTGA 13476
Query 199593 TCGTCTTACCCGTGAGAGTTTTCACAAAA 199621
| |||||||| || | ||||| ||||||
Sbjct 13475 TAGTCTTACCAGTTAAGGTTTTGACAAAA 13447
>seq182
Length=55006
Score = 100 bits (110), Expect = 7e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | ||| || || || || ||||| | ||||||||||| |||||| || ||
Sbjct 1881 TCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 1822
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||||| || || || || ||||| | | || ||||| || || ||||||
Sbjct 1821 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTT 1762
Query 199534 CTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGA 199592
|| || || ||| || || || || | |||||| | | ||| || ||||| || |
Sbjct 1761 GTCTTGGAT-TTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAA 1703
Query 199593 TCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
| || ||||| || | |||||| || ||||||||
Sbjct 1702 TGGTTTTACCTGTCAAAGTTTTAACGAAAATTTG 1669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178916992995435
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |