Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq82 125 8e-24 >seq82 Length=13639 Score = 125 bits (138), Expect = 8e-24 Identities = 901/1443 (62%), Gaps = 47/1443 (3%) Strand=Plus/Plus Query 109726 AATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCA 109785 |||||||||| | || | || ||| ||||| | ||| | ||||||||||| || Sbjct 11535 AATTCACCAGACAACGTTCTTCTAGAGTACATGTTTGAAGTGAATGGTTCGAAACATTCG 11594 Query 109786 TTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTG--T 109843 |||| || | |||||| | || || ||||| ||||| ||||||| | || | || | Sbjct 11595 TTGTAACCCAAGATTTGCGATGTTGATGCTGTTGGCATTGGAGCCA--ATAACAATGAGT 11652 Query 109844 TTCGGAGACCC--TTCGTC--TTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCA 109899 ||| | || ||| | ||| | |||| ||| |||| || | || | Sbjct 11653 TTCTCAATCCAGTTTCCACAATTTTTTCTCTCAAAGATT----CCCATTC----CCACAA 11704 Query 109900 CTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAA 109959 | | || ||| ||||||||| || ||| | ||||| | | ||| || ||| Sbjct 11705 ATCAGTTGGAGCTCT--ATCCCACATGTCAAATTGCAAAACACCTTGTGAAGCTGGTGAA 11762 Query 109960 CCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCC 110019 || | |||| | ||| | || || || |||||| ||| ||||| || | ||| Sbjct 11763 CCTTGGAAAGATTGGTATGGACCTTCTTCCACGGCCATTTCGTTTGAAGATTCCAATGCA 11822 Query 110020 GCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAG 110079 ||||| |||| || || ||||| ||| ||||| | | | ||| | || || Sbjct 11823 GCATGGTACAATGTTTCGAAAATTTGAATATTCAGTTGTTTGGCTTGTTCGGAATCAAAT 11882 Query 110080 GGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGA 110139 |||| | |||| ||||| ||| || | ||| |||||||| || |||| || | Sbjct 11883 GGAATTCTCAAAAGCATAAAAGTATCAGCCAAACCTTGAACACCAAGGGCAATAGGTCTG 11942 Query 110140 TGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGA 110199 || |||| || ||| || |||||||| || |||||| | || | ||| ||||| | Sbjct 11943 TGTCTCATATTTGAGTTTCTTGCAGTTTCCACAGGGTAATAATTTCTGTCAATGACTCTG 12002 Query 110200 TTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTT- 110258 || | ||| | || | || | | || || | ||| | | |||| | |||| Sbjct 12003 TTCAAATTTCTTGTAATGACTTTTGCAACATCGTGTAATTTTTGGAAATCATAAGTTTGT 12062 Query 110259 -------CGTCTCCTTA----TTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCAC 110307 | ||| || | |||| | ||| | ||||||||| || | ||| || Sbjct 12063 TGTTGACCATCTTCTGAAACATTGATGAAAGCGGGCAAAGCAATAGAAGCCAAATTACAA 12122 Query 110308 ACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTA 110367 |||| ||| ||||| || || | ||||||| |||||| |||||| || || || Sbjct 12123 ACAGCAGTTTCGTCGTTATCTGAATATTCCACAATTTCACAACACAAATTAGATGATTTG 12182 Query 110368 ATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTAT 110427 || || || || || ||||| ||||| ||| || ||||| || || | || || Sbjct 12183 ATAGTTCCTAAATTTTTTTGATTAGATTTTTTGTTACAAGCATCTTTGTAAACAATAAAT 12242 Query 110428 GGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACA 110487 || ||||| ||||| || |||| | | || || | ||||| | || | | Sbjct 12243 GGTGTACCTGTTTCAGTTTGTGCTTCCAAGATAGCATACCATAATTTTTGTGCTTTAATA 12302 Query 110488 GTTGCGTTAGCGAGACCTTCCTCCT----CGTACTTGGTGTACAAGTCCTCAAATTCCTG 110543 ||| || | |||||| || | || | ||||||| | ||||| || Sbjct 12303 GTTTTTCTACCT----CTTCCTTCTGAAACATATCTATTGTACAATTTTTCAAAATCTGC 12358 Query 110544 TCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACC 110603 || || |||||| | ||| || | ||| | || | | ||||| | | Sbjct 12359 ACCATAAACATCACTTAAACCTGGAGCTTCACTTGGAGAAAACAATGTCCAATCTGAATT 12418 Query 110604 CTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCA 110663 || | ||| | | ||| || | || |||| ||| | || | || | || | Sbjct 12419 TTCTTTAACTTTTTGCATAAATAAATCTGGAACCCATAATGCAGGAAACAAATCTCTTGC 12478 Query 110664 ACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTG 110723 | | ||||| | ||| || || || | || | ||| || | ||||| || Sbjct 12479 TCTAATTTCTTCTTTACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATG 12538 Query 110724 CCATGGTTCGAGATAGACAGCGATGGATCC----CTTACGACGACCCGCCTGGTTAACAT 110779 ||||||||| | ||| | ||| | | || ||| | ||| | || | ||||| Sbjct 12539 CCATGGTTCTAAATAAAGAGCAAAAGCACCAGGTCTTTT-ATTACCACCTTGATCAACAT 12597 Query 110780 AGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTG 110839 | | ||| || |||||| || || | ||| ||||| | ||||| || ||||| | Sbjct 12598 ATCTTGCAGTATTATTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTCCCATTAG 12657 Query 110840 TACCCCTAAT-TCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCC 110898 |||| ||| | | || ||| | ||| | || ||||| | |||||||||||| Sbjct 12658 TACCTGCAATATAAGAACCGGTTGAT-CTAATATTATGAATATGAAGACCAATACCACCA 12716 Query 110899 GCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCT 110958 || ||| ||| ||||| ||| | | ||| |||||||||||||||| ||||| Sbjct 12717 GCAGTTTTAGAAATCAAAGCACATTCTTTTAAAGTATCATAAATACCATCAATGGAATCG 12776 Query 110959 GCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAG 111018 | || | |||| || || || |||||||| ||||| | || ||||| |||||||| Sbjct 12777 TCTTTCATAGCAACAAGGAAACATGAAGACATTTGAGGTCTTGGTGTTCCAGCATTGAAT 12836 Query 111019 AGTGTAGGTGTCGCATGAATGAACAGACCT-TGGGACATCTTGTTGTATGTGTCGAGTGC 111077 | || || | ||||| |||| | | || |||||| || || || || | | Sbjct 12837 AAAGTTGGAGATGCATGTGTGAA-ATATCTCAAAGACATCAAATTATAAGTTTCCAAGAC 12895 Query 111078 GGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGT 111137 | |||| ||| ||||| || | ||||||| ||||| || || |||||| | Sbjct 12896 TTTTTCAATATCTGAACCATGAATCCCGACAGCAACTCTCATGATCAAATGTTGAGGTCT 12955 Query 111138 TTC 111140 ||| Sbjct 12956 TTC 12958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588973754529000