Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq82 125 8e-24
>seq82
Length=13639
Score = 125 bits (138), Expect = 8e-24
Identities = 901/1443 (62%), Gaps = 47/1443 (3%)
Strand=Plus/Plus
Query 109726 AATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCA 109785
|||||||||| | || | || ||| ||||| | ||| | ||||||||||| ||
Sbjct 11535 AATTCACCAGACAACGTTCTTCTAGAGTACATGTTTGAAGTGAATGGTTCGAAACATTCG 11594
Query 109786 TTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTG--T 109843
|||| || | |||||| | || || ||||| ||||| ||||||| | || | || |
Sbjct 11595 TTGTAACCCAAGATTTGCGATGTTGATGCTGTTGGCATTGGAGCCA--ATAACAATGAGT 11652
Query 109844 TTCGGAGACCC--TTCGTC--TTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCA 109899
||| | || ||| | ||| | |||| ||| |||| || | || |
Sbjct 11653 TTCTCAATCCAGTTTCCACAATTTTTTCTCTCAAAGATT----CCCATTC----CCACAA 11704
Query 109900 CTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAA 109959
| | || ||| ||||||||| || ||| | ||||| | | ||| || |||
Sbjct 11705 ATCAGTTGGAGCTCT--ATCCCACATGTCAAATTGCAAAACACCTTGTGAAGCTGGTGAA 11762
Query 109960 CCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCC 110019
|| | |||| | ||| | || || || |||||| ||| ||||| || | |||
Sbjct 11763 CCTTGGAAAGATTGGTATGGACCTTCTTCCACGGCCATTTCGTTTGAAGATTCCAATGCA 11822
Query 110020 GCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAG 110079
||||| |||| || || ||||| ||| ||||| | | | ||| | || ||
Sbjct 11823 GCATGGTACAATGTTTCGAAAATTTGAATATTCAGTTGTTTGGCTTGTTCGGAATCAAAT 11882
Query 110080 GGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGA 110139
|||| | |||| ||||| ||| || | ||| |||||||| || |||| || |
Sbjct 11883 GGAATTCTCAAAAGCATAAAAGTATCAGCCAAACCTTGAACACCAAGGGCAATAGGTCTG 11942
Query 110140 TGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGA 110199
|| |||| || ||| || |||||||| || |||||| | || | ||| ||||| |
Sbjct 11943 TGTCTCATATTTGAGTTTCTTGCAGTTTCCACAGGGTAATAATTTCTGTCAATGACTCTG 12002
Query 110200 TTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTT- 110258
|| | ||| | || | || | | || || | ||| | | |||| | ||||
Sbjct 12003 TTCAAATTTCTTGTAATGACTTTTGCAACATCGTGTAATTTTTGGAAATCATAAGTTTGT 12062
Query 110259 -------CGTCTCCTTA----TTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCAC 110307
| ||| || | |||| | ||| | ||||||||| || | ||| ||
Sbjct 12063 TGTTGACCATCTTCTGAAACATTGATGAAAGCGGGCAAAGCAATAGAAGCCAAATTACAA 12122
Query 110308 ACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTA 110367
|||| ||| ||||| || || | ||||||| |||||| |||||| || || ||
Sbjct 12123 ACAGCAGTTTCGTCGTTATCTGAATATTCCACAATTTCACAACACAAATTAGATGATTTG 12182
Query 110368 ATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTAT 110427
|| || || || || ||||| ||||| ||| || ||||| || || | || ||
Sbjct 12183 ATAGTTCCTAAATTTTTTTGATTAGATTTTTTGTTACAAGCATCTTTGTAAACAATAAAT 12242
Query 110428 GGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACA 110487
|| ||||| ||||| || |||| | | || || | ||||| | || | |
Sbjct 12243 GGTGTACCTGTTTCAGTTTGTGCTTCCAAGATAGCATACCATAATTTTTGTGCTTTAATA 12302
Query 110488 GTTGCGTTAGCGAGACCTTCCTCCT----CGTACTTGGTGTACAAGTCCTCAAATTCCTG 110543
||| || | |||||| || | || | ||||||| | ||||| ||
Sbjct 12303 GTTTTTCTACCT----CTTCCTTCTGAAACATATCTATTGTACAATTTTTCAAAATCTGC 12358
Query 110544 TCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACC 110603
|| || |||||| | ||| || | ||| | || | | ||||| | |
Sbjct 12359 ACCATAAACATCACTTAAACCTGGAGCTTCACTTGGAGAAAACAATGTCCAATCTGAATT 12418
Query 110604 CTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCA 110663
|| | ||| | | ||| || | || |||| ||| | || | || | || |
Sbjct 12419 TTCTTTAACTTTTTGCATAAATAAATCTGGAACCCATAATGCAGGAAACAAATCTCTTGC 12478
Query 110664 ACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTG 110723
| | ||||| | ||| || || || | || | ||| || | ||||| ||
Sbjct 12479 TCTAATTTCTTCTTTACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATG 12538
Query 110724 CCATGGTTCGAGATAGACAGCGATGGATCC----CTTACGACGACCCGCCTGGTTAACAT 110779
||||||||| | ||| | ||| | | || ||| | ||| | || | |||||
Sbjct 12539 CCATGGTTCTAAATAAAGAGCAAAAGCACCAGGTCTTTT-ATTACCACCTTGATCAACAT 12597
Query 110780 AGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTG 110839
| | ||| || |||||| || || | ||| ||||| | ||||| || ||||| |
Sbjct 12598 ATCTTGCAGTATTATTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTCCCATTAG 12657
Query 110840 TACCCCTAAT-TCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCC 110898
|||| ||| | | || ||| | ||| | || ||||| | ||||||||||||
Sbjct 12658 TACCTGCAATATAAGAACCGGTTGAT-CTAATATTATGAATATGAAGACCAATACCACCA 12716
Query 110899 GCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCT 110958
|| ||| ||| ||||| ||| | | ||| |||||||||||||||| |||||
Sbjct 12717 GCAGTTTTAGAAATCAAAGCACATTCTTTTAAAGTATCATAAATACCATCAATGGAATCG 12776
Query 110959 GCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAG 111018
| || | |||| || || || |||||||| ||||| | || ||||| ||||||||
Sbjct 12777 TCTTTCATAGCAACAAGGAAACATGAAGACATTTGAGGTCTTGGTGTTCCAGCATTGAAT 12836
Query 111019 AGTGTAGGTGTCGCATGAATGAACAGACCT-TGGGACATCTTGTTGTATGTGTCGAGTGC 111077
| || || | ||||| |||| | | || |||||| || || || || | |
Sbjct 12837 AAAGTTGGAGATGCATGTGTGAA-ATATCTCAAAGACATCAAATTATAAGTTTCCAAGAC 12895
Query 111078 GGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGT 111137
| |||| ||| ||||| || | ||||||| ||||| || || |||||| |
Sbjct 12896 TTTTTCAATATCTGAACCATGAATCCCGACAGCAACTCTCATGATCAAATGTTGAGGTCT 12955
Query 111138 TTC 111140
|||
Sbjct 12956 TTC 12958
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588973754529000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |