Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq82 192 7e-44
>seq82
Length=13639
Score = 192 bits (212), Expect = 7e-44
Identities = 479/719 (67%), Gaps = 20/719 (3%)
Strand=Plus/Plus
Query 105923 GTTCTTCTCAGA-TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGAT 105981
|||||||| ||| || ||||| | ||| | ||||| || ||||| || | |||||||||
Sbjct 11550 GTTCTTCT-AGAGTACATGTTTGAAGTGAATGGTTCGAAACATTCGTTGTAACCCAAGAT 11608
Query 105982 TTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTC 106041
||| | || || |||||||||||||| |||| || | ||| | | || ||||
Sbjct 11609 TTGCGATGTTGATGCTGTTGGCATTGGAGCCAATAACAATGAGTTTCTCAATCCAGTTTC 11668
Query 106042 CTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGT--TGAGCTTGGTTTCACCTTCCCAC 106099
| || ||| | | | ||||| || | | || |||| | | ||||||
Sbjct 11669 CACAATTTTTTCTCTCAAAGATTCCCATTCCCACAAATCAG-TTGGAG-CTCTATCCCAC 11726
Query 106100 ATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCT 106159
|| |||||||| | || ||||| || | || ||||| | || | | || | ||||
Sbjct 11727 ATGTCAAATTGCAAAACACCTTGTGAAGCTGGTGAACCTTGGAAAGATTGGTATGGACCT 11786
Query 106160 TGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATA 106219
| | | |||| ||| | |||| | || || |||| ||||| || ||
Sbjct 11787 TCTTCCACGGCCATTTCGTTTGAAGATTCCAATGCAGCATGGTACAATGTTTCGAAAATT 11846
Query 106220 CGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATAC 106278
|| ||||| | ||||||| || |||||||||| | | || || |||||
Sbjct 11847 TGAATATTCAGTTGTTTGGCTTGTTCGGAATCAAATG-GAATTCTCAAAAGCATAAAAGT 11905
Query 106279 ATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGC 106338
||| || | |||||||||||| | ||||||||||||||| |||||| || |||| ||
Sbjct 11906 ATCAGCCAAACCTTGAACACCAAGGGCAATAGGTCTGTGTCTCATATTTGAGTTTCTTGC 11965
Query 106339 AGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTT 106398
||| || || || ||| |||||||||||||||||| ||| | |||| | |||| | ||
Sbjct 11966 AGTTTCCACAGGGTAATAATTTCTGTCAATGACTCTGTTCAAATTTCTTGTAATGACTTT 12025
Query 106399 TGTGATTTCATGAAGTTTTTCATAATCAAAAGT------GCGAGTCTCTT------CATT 106446
|| | || || | ||||| ||||| |||| || |||| ||||
Sbjct 12026 TGCAACATCGTGTAATTTTTGGAAATCATAAGTTTGTTGTTGACCATCTTCTGAAACATT 12085
Query 106447 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 106506
|| | || | || || || |||||||| |||||||| || || || |||||||
Sbjct 12086 GATGAAAGCGGGCAAAGCAATAGAAGCCAAATTACAAACAGCAGTTTCGTCGTTATCTGA 12145
Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566
|| || | |||||| |||||| || || || || || || ||||| ||||| ||
Sbjct 12146 ATATTCCACAATTTCACAACACAAATTAGATGATTTGATAGTTCCTAAATTTTTTTGATT 12205
Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTG 106625
| |||||||| || ||||| ||||| | || | || || || || || || ||||
Sbjct 12206 AGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGTACCTGTTTCAGTTTGTG 12264
Score = 89.7 bits (98), Expect = 6e-13
Identities = 248/378 (66%), Gaps = 2/378 (1%)
Strand=Plus/Plus
Query 106940 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 106999
||| |||||| ||||| | || || || || || | || ||||||||| | |||
Sbjct 12582 CCACCTTGATCAACATATCTTGCAGTATTATTGAAAACTCTAATCATTGGAATCAATCCA 12641
Query 107000 TCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGC 107059
| || ||||| || || |||| ||| | | ||| | || ||| || ||
Sbjct 12642 TTAGAAGTCCCATTAGTACCTGCAATATAAGAACCGGTTGATCTAATATTATGAATATGA 12701
Query 107060 ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATA 107119
| |||||||| ||||| || || || ||||| || | | ||| |||| |||
Sbjct 12702 AGACCAATACCACCAGCAGTTTTAGAAATCAAAGCACATTCTTTTAAAGTATCATAAATA 12761
Query 107120 CCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGT 107179
|| | || || || || || | || | |||||| || ||||| || |||||||||
Sbjct 12762 CCATCAATGGAATCGTCTTTCATAGCAACAAGGAAACATGAAGACATTTGAGGTCTTGGT 12821
Query 107180 GTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTC 107238
|| ||||||||||| | ||||| | ||| || |||| ||| || |||||| |
Sbjct 12822 GTTCCAGCATTGAATAAAGTTGGAGATGCATGTGTGAA-ATATCTCAAAGACATCAAATT 12880
Query 107239 GTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAA 107298
|| || |||||||| ||||| ||| || || || |||| || || | ||| |
Sbjct 12881 ATAAGTTTCCAAGACTTTTTCAATATCTGAACCATGAATCCCGACAGCAACTCTCATGAT 12940
Query 107299 CATGTATTGGGGTGTTTC 107316
|| | ||| ||| ||||
Sbjct 12941 CAAATGTTGAGGTCTTTC 12958
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589978550698200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |