Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq82 192 7e-44 >seq82 Length=13639 Score = 192 bits (212), Expect = 7e-44 Identities = 479/719 (67%), Gaps = 20/719 (3%) Strand=Plus/Plus Query 105923 GTTCTTCTCAGA-TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGAT 105981 |||||||| ||| || ||||| | ||| | ||||| || ||||| || | ||||||||| Sbjct 11550 GTTCTTCT-AGAGTACATGTTTGAAGTGAATGGTTCGAAACATTCGTTGTAACCCAAGAT 11608 Query 105982 TTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTC 106041 ||| | || || |||||||||||||| |||| || | ||| | | || |||| Sbjct 11609 TTGCGATGTTGATGCTGTTGGCATTGGAGCCAATAACAATGAGTTTCTCAATCCAGTTTC 11668 Query 106042 CTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGT--TGAGCTTGGTTTCACCTTCCCAC 106099 | || ||| | | | ||||| || | | || |||| | | |||||| Sbjct 11669 CACAATTTTTTCTCTCAAAGATTCCCATTCCCACAAATCAG-TTGGAG-CTCTATCCCAC 11726 Query 106100 ATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCT 106159 || |||||||| | || ||||| || | || ||||| | || | | || | |||| Sbjct 11727 ATGTCAAATTGCAAAACACCTTGTGAAGCTGGTGAACCTTGGAAAGATTGGTATGGACCT 11786 Query 106160 TGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATA 106219 | | | |||| ||| | |||| | || || |||| ||||| || || Sbjct 11787 TCTTCCACGGCCATTTCGTTTGAAGATTCCAATGCAGCATGGTACAATGTTTCGAAAATT 11846 Query 106220 CGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATAC 106278 || ||||| | ||||||| || |||||||||| | | || || ||||| Sbjct 11847 TGAATATTCAGTTGTTTGGCTTGTTCGGAATCAAATG-GAATTCTCAAAAGCATAAAAGT 11905 Query 106279 ATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGC 106338 ||| || | |||||||||||| | ||||||||||||||| |||||| || |||| || Sbjct 11906 ATCAGCCAAACCTTGAACACCAAGGGCAATAGGTCTGTGTCTCATATTTGAGTTTCTTGC 11965 Query 106339 AGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTT 106398 ||| || || || ||| |||||||||||||||||| ||| | |||| | |||| | || Sbjct 11966 AGTTTCCACAGGGTAATAATTTCTGTCAATGACTCTGTTCAAATTTCTTGTAATGACTTT 12025 Query 106399 TGTGATTTCATGAAGTTTTTCATAATCAAAAGT------GCGAGTCTCTT------CATT 106446 || | || || | ||||| ||||| |||| || |||| |||| Sbjct 12026 TGCAACATCGTGTAATTTTTGGAAATCATAAGTTTGTTGTTGACCATCTTCTGAAACATT 12085 Query 106447 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 106506 || | || | || || || |||||||| |||||||| || || || ||||||| Sbjct 12086 GATGAAAGCGGGCAAAGCAATAGAAGCCAAATTACAAACAGCAGTTTCGTCGTTATCTGA 12145 Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566 || || | |||||| |||||| || || || || || || ||||| ||||| || Sbjct 12146 ATATTCCACAATTTCACAACACAAATTAGATGATTTGATAGTTCCTAAATTTTTTTGATT 12205 Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTG 106625 | |||||||| || ||||| ||||| | || | || || || || || || |||| Sbjct 12206 AGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGTACCTGTTTCAGTTTGTG 12264 Score = 89.7 bits (98), Expect = 6e-13 Identities = 248/378 (66%), Gaps = 2/378 (1%) Strand=Plus/Plus Query 106940 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 106999 ||| |||||| ||||| | || || || || || | || ||||||||| | ||| Sbjct 12582 CCACCTTGATCAACATATCTTGCAGTATTATTGAAAACTCTAATCATTGGAATCAATCCA 12641 Query 107000 TCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGC 107059 | || ||||| || || |||| ||| | | ||| | || ||| || || Sbjct 12642 TTAGAAGTCCCATTAGTACCTGCAATATAAGAACCGGTTGATCTAATATTATGAATATGA 12701 Query 107060 ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATA 107119 | |||||||| ||||| || || || ||||| || | | ||| |||| ||| Sbjct 12702 AGACCAATACCACCAGCAGTTTTAGAAATCAAAGCACATTCTTTTAAAGTATCATAAATA 12761 Query 107120 CCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGT 107179 || | || || || || || | || | |||||| || ||||| || ||||||||| Sbjct 12762 CCATCAATGGAATCGTCTTTCATAGCAACAAGGAAACATGAAGACATTTGAGGTCTTGGT 12821 Query 107180 GTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTC 107238 || ||||||||||| | ||||| | ||| || |||| ||| || |||||| | Sbjct 12822 GTTCCAGCATTGAATAAAGTTGGAGATGCATGTGTGAA-ATATCTCAAAGACATCAAATT 12880 Query 107239 GTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAA 107298 || || |||||||| ||||| ||| || || || |||| || || | ||| | Sbjct 12881 ATAAGTTTCCAAGACTTTTTCAATATCTGAACCATGAATCCCGACAGCAACTCTCATGAT 12940 Query 107299 CATGTATTGGGGTGTTTC 107316 || | ||| ||| |||| Sbjct 12941 CAAATGTTGAGGTCTTTC 12958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978550698200