Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq182 185 2e-41 seq230 168 1e-36 seq70 156 9e-33 >seq182 Length=55006 Score = 185 bits (204), Expect = 2e-41 Identities = 174/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | |||||| ||||| ||||||||||| ||||| || | | ||| Sbjct 1887 TCTCAATCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGT 1828 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | || ||||| || ||||| | || ||||||||| || || || || Sbjct 1827 TCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACC 1768 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||||||||| ||||| || || || ||||||||||| || ||| ||||| | Sbjct 1767 TTCTTTGTCTTGGATTTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAA 1708 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| || || |||||||||||||| ||||| | |||||| Sbjct 1707 GGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCAT 1666 >seq230 Length=21327 Score = 168 bits (186), Expect = 1e-36 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | |||||||||||| ||||||||||| ||||| || | | ||| Sbjct 13660 TCTCAATCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGT 13601 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | || ||||| || ||||| | || ||||||||| || ||||| || Sbjct 13600 TCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACC 13541 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||||||||| ||||| |||||||| || |||||||| || ||| ||||| || Sbjct 13540 TTCTTTGTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGACTTCTAG 13481 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || | ||||| || || || ||||| || || Sbjct 13480 AGTGATAGTCTTACCAGTTAAGGTTTTGACAAA 13448 >seq70 Length=20209 Score = 156 bits (172), Expect = 9e-33 Identities = 169/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | ||| || || ||||| ||||| || ||||| |||| | || Sbjct 19583 TCTCAATCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGT 19642 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | ||| ||||| || || || | || ||||||||| || ||||| || Sbjct 19643 TCTGCCGTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCC 19702 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||| || || || ||||||||| || |||||||| || ||| ||||| | Sbjct 19703 TTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAA 19762 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || | || || || ||||||||||| || || | |||||||| Sbjct 19763 AGTGATGGTTTTCCCAGTCAAAGTTTTAACAAAAATTTGCATTT 19806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109477264353935