Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq182 91.5 1e-13 seq70 82.4 5e-11 >seq182 Length=55006 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| |||||||||||||||| ||| |||||| |||||||| ||||| || Sbjct 1892 CCACCTCTCAATCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGAC 1833 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | ||| |||| |||| ||||| || ||||| || | || ||| ||||| | || Sbjct 1832 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 1773 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || || ||||| || || ||| || | || | ||| || || || Sbjct 1772 ATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACT 1713 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || | ||| |||||||| || || | ||| || || || || ||||| || Sbjct 1712 TCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTT 1663 >seq70 Length=20209 Score = 82.4 bits (90), Expect = 5e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| |||||||||||||| | || || || || ||||| ||||| || Sbjct 19578 CCACCTCTCAATCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGAC 19637 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | ||| | || |||| |||||| || ||||| || | || ||| ||||| | || Sbjct 19638 AACGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGA 19697 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||| || ||||| ||||| |||||| | || | || || ||||| Sbjct 19698 ATCCCTTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACT 19757 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || | || |||||||| || || | ||| || ||||| || ||||| || Sbjct 19758 TCCAAAGTGATGGTTTTCCCAGTCAAAGTTTTAACAAAAATTTGCATTTT 19807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632393276040