Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq140 289 3e-73
>seq140
Length=127049
Score = 289 bits (320), Expect = 3e-73
Identities = 643/956 (67%), Gaps = 24/956 (3%)
Strand=Plus/Plus
Query 36828 TAAAAATCTTCATCTAACGTAAA------TTTTA---TTTCCTTATTACT--ATT----C 36872
|||||||||||||| || ||||| || | |||| ||||||| ||| |
Sbjct 6179 TAAAAATCTTCATCAAAGGTAAAAGCACCTTCTGCACTTTCTGTATTACTTGATTTTGCC 6238
Query 36873 ATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCT 36932
||||| || ||||||||| || ||||| | |||| || ||||| || || ||| ||
Sbjct 6239 ATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGCT 6298
Query 36933 AGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGA- 36991
| ||| |||||||||||||||||||||||||| || |||||| ||| | | ||| |
Sbjct 6299 AATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATA-ATATTTTT-CATTAC 6356
Query 36992 -TAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGT 37050
|||| | || | ||||| ||||||||||| | |||| | ||| | | || |
Sbjct 6357 CTAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCAT 6416
Query 37051 TTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAG 37110
| ||||| | || || || | |||||||| || | || |||||| || ||||
Sbjct 6417 TCATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACAG 6476
Query 37111 CATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACA 37170
| || ||| || | || | || | | ||| || || |||| || ||| |
Sbjct 6477 CTTCAGTAATAATTCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAATA 6536
Query 37171 ATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGG 37230
||| ||||||||||||| |||| ||||||||||||| ||||||||||| ||||| |
Sbjct 6537 ATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAAG 6596
Query 37231 TTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAA 37290
| || |||||||| || || |||| || | |||||| ||||| ||||| || || ||||
Sbjct 6597 TCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAAA 6656
Query 37291 AGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAAT 37350
|||||| ||||||||| || |||||||| || | | | | | || || | | ||
Sbjct 6657 AGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCAT 6716
Query 37351 CAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTG 37410
| ||||||| | | | ||| || || ||| ||| | | ||| |||||||| |
Sbjct 6717 CTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATAG 6776
Query 37411 CTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTAT 37470
| || || | || | |||||| |||| | ||||||||||| || | | ||
Sbjct 6777 CATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGCGAAT 6836
Query 37471 ACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAG 37530
| ||||| || |||||||| || || || || || |||||||| ||||||| |
Sbjct 6837 ATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTCTG 6896
Query 37531 ATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAG 37590
| || || || | || ||| | || || ||||| || |||||||| ||
Sbjct 6897 GAATCTGCACTTCAGCACTGAAATTCTCCACCAAATTCTCATTGACAATCCCATCTGAAG 6956
Query 37591 CTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCATTTGATAATTTTT 37647
| || || || || | ||| | || ||| ||||||| ||||| | || |
Sbjct 6957 CAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTATTAT 7016
Query 37648 TCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATG 37707
|||| || | |||||||| || | ||| | ||| || | |||||||| || |
Sbjct 7017 TCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGCTTCAG 7076
Query 37708 CACGTTTATACATCGT-CCAAATATCATTATGTTGTATTGGAAATATTACAAATCT 37762
||||||| || | | | ||| || |||| | || |||||||| | ||||||||
Sbjct 7077 CACGTTTGTA-AGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATCT 7131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592314541792200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |