Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq140 289 3e-73 >seq140 Length=127049 Score = 289 bits (320), Expect = 3e-73 Identities = 643/956 (67%), Gaps = 24/956 (3%) Strand=Plus/Plus Query 36828 TAAAAATCTTCATCTAACGTAAA------TTTTA---TTTCCTTATTACT--ATT----C 36872 |||||||||||||| || ||||| || | |||| ||||||| ||| | Sbjct 6179 TAAAAATCTTCATCAAAGGTAAAAGCACCTTCTGCACTTTCTGTATTACTTGATTTTGCC 6238 Query 36873 ATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCT 36932 ||||| || ||||||||| || ||||| | |||| || ||||| || || ||| || Sbjct 6239 ATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGCT 6298 Query 36933 AGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGA- 36991 | ||| |||||||||||||||||||||||||| || |||||| ||| | | ||| | Sbjct 6299 AATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATA-ATATTTTT-CATTAC 6356 Query 36992 -TAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGT 37050 |||| | || | ||||| ||||||||||| | |||| | ||| | | || | Sbjct 6357 CTAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCAT 6416 Query 37051 TTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAG 37110 | ||||| | || || || | |||||||| || | || |||||| || |||| Sbjct 6417 TCATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACAG 6476 Query 37111 CATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACA 37170 | || ||| || | || | || | | ||| || || |||| || ||| | Sbjct 6477 CTTCAGTAATAATTCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAATA 6536 Query 37171 ATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGG 37230 ||| ||||||||||||| |||| ||||||||||||| ||||||||||| ||||| | Sbjct 6537 ATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAAG 6596 Query 37231 TTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAA 37290 | || |||||||| || || |||| || | |||||| ||||| ||||| || || |||| Sbjct 6597 TCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAAA 6656 Query 37291 AGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAAT 37350 |||||| ||||||||| || |||||||| || | | | | | || || | | || Sbjct 6657 AGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCAT 6716 Query 37351 CAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTG 37410 | ||||||| | | | ||| || || ||| ||| | | ||| |||||||| | Sbjct 6717 CTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATAG 6776 Query 37411 CTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTAT 37470 | || || | || | |||||| |||| | ||||||||||| || | | || Sbjct 6777 CATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGCGAAT 6836 Query 37471 ACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAG 37530 | ||||| || |||||||| || || || || || |||||||| ||||||| | Sbjct 6837 ATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTCTG 6896 Query 37531 ATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAG 37590 | || || || | || ||| | || || ||||| || |||||||| || Sbjct 6897 GAATCTGCACTTCAGCACTGAAATTCTCCACCAAATTCTCATTGACAATCCCATCTGAAG 6956 Query 37591 CTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCATTTGATAATTTTT 37647 | || || || || | ||| | || ||| ||||||| ||||| | || | Sbjct 6957 CAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTATTAT 7016 Query 37648 TCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATG 37707 |||| || | |||||||| || | ||| | ||| || | |||||||| || | Sbjct 7017 TCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGCTTCAG 7076 Query 37708 CACGTTTATACATCGT-CCAAATATCATTATGTTGTATTGGAAATATTACAAATCT 37762 ||||||| || | | | ||| || |||| | || |||||||| | |||||||| Sbjct 7077 CACGTTTGTA-AGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATCT 7131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592314541792200