Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq182 100 2e-16
seq70 87.8 1e-12
>seq182
Length=55006
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
||| ||||| || || ||| ||||||||||| ||||| ||||| | | ||| | | ||
Sbjct 1878 CAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 1819
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
||||| || ||||| ||||| |||| || ||||| || | || | || || |||||
Sbjct 1818 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTC 1759
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
|| || ||| ||| | | | || || | || || |||| ||||| ||
Sbjct 1758 TTGGATTTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAATGGT 1699
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTGT 48771
||| || ||||||||||| || ||||| |||||| |||
Sbjct 1698 TTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTTGT 1661
>seq70
Length=20209
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
||| ||||| || || || ||| ||||| || ||||| || || | ||| ||||
Sbjct 19592 CAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCCGTC 19651
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|||||||| ||||| ||||| |||| || ||||| || | |||| || || |||||
Sbjct 19652 TTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTGTC 19711
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||||| || || | | | ||||| | || || |||| || || ||
Sbjct 19712 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAAGTGATGGT 19771
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||| || ||||||||||| |||||||| |||||
Sbjct 19772 TTTCCCAGTCAAAGTTTTAACAAAAATTTGCAT 19804
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380936183983515
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |