Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq182 100 2e-16 seq70 87.8 1e-12 >seq182 Length=55006 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| ||||| || || ||| ||||||||||| ||||| ||||| | | ||| | | || Sbjct 1878 CAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 1819 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||| || ||||| ||||| |||| || ||||| || | || | || || ||||| Sbjct 1818 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTC 1759 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 || || ||| ||| | | | || || | || || |||| ||||| || Sbjct 1758 TTGGATTTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAATGGT 1699 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTGT 48771 ||| || ||||||||||| || ||||| |||||| ||| Sbjct 1698 TTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTTGT 1661 >seq70 Length=20209 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| ||||| || || || ||| ||||| || ||||| || || | ||| |||| Sbjct 19592 CAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCCGTC 19651 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||||||| ||||| ||||| |||| || ||||| || | |||| || || ||||| Sbjct 19652 TTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTGTC 19711 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||||| || || | | | ||||| | || || |||| || || || Sbjct 19712 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAAGTGATGGT 19771 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| || ||||||||||| |||||||| ||||| Sbjct 19772 TTTCCCAGTCAAAGTTTTAACAAAAATTTGCAT 19804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380936183983515