Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq82 277 9e-70 >seq82 Length=13639 Score = 277 bits (306), Expect = 9e-70 Identities = 488/704 (69%), Gaps = 19/704 (3%) Strand=Plus/Plus Query 25890 TTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAA 25949 ||||| | || || |||||| | ||||| | |||||| | ||||||||||||||||| Sbjct 12391 TTGGAGAAAACAATGTCCAATCTGAATTTTCTTTAACTTTTTGCATAAATAAATCTGGAA 12450 Query 25950 TCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTA 26009 ||| | |||| ||| |||||||| ||||| ||||||||||| || ||||| || | Sbjct 12451 CCCATAATGCAGGAAACAAATCTCTTGCTCTAATTTCTTCTTTACCATGATTTTTCCGAA 12510 Query 26010 GATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTT 26069 ||| | |||||||||||||| ||||||||||||||||| | ||||||| ||| Sbjct 12511 TATCAATAAAATCAAAAATATCACTATGCCATGGTTCTAAATAAAGAGCAAAAGCACCAG 12570 Query 26070 TTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129 |||||| ||||||||||| || ||||||||||| | |||||||||| | | ||||| Sbjct 12571 GTCTTTTATTACCACCTTGATCAACATATCTTGCAGTATTATTGAAAACTCTAATCATTG 12630 Query 26130 GAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATAT 26189 ||| |||||| | ||| || || || | ||| | || || || |||||||||| Sbjct 12631 GAATCAATCCATTAGAAGTCCCATTAGTACCTGCAATATAAGAACCGGTTGATCTAATAT 12690 Query 26190 CGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTG 26249 ||| ||||| ||| || |||||||| ||| ||||| ||||| ||| | | Sbjct 12691 TATGAATATGAAGACCAATACCACCAGCAGTTTTAGAAATCAAAGCACATTCTTTTAAAG 12750 Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309 |||| |||| || | ||| ||| ||||||| | | | ||||| ||||| | || Sbjct 12751 TATCATAAATACCATCAATGGAATCGTCTTTCATAGCAACAAGGAAACATGAAGACATTT 12810 Query 26310 GCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTCA- 26368 | | | |||||| | ||| ||||| || || | ||||| || |||||| ||| Sbjct 12811 GAGGTCTTGGTGTTCCAGCATTGAATAAAGTTGGAGATGCATGTGTGAAATATC--TCAA 12868 Query 26369 ----CTCAAAGCTGTATAAGTTTCAAGAACTTCATCGATATTGTAATTACTAACTTCAAT 26424 ||||| |||||||||| | |||| || |||| || | || | | Sbjct 12869 AGACATCAAA---TTATAAGTTTCCAAGACTTTTTCAATATCTGAACCATGAATCCCGAC 12925 Query 26425 AGCTGTTCTTAACCACATATATTGAGGTCGTTCAATTACATTATTTTCC---GCATCTCT 26481 ||| ||| | || || |||||||| |||| || | || ||| | ||| | Sbjct 12926 AGCAACTCTCATGATCAAATGTTGAGGTCTTTCA---GCAAT-TTGTCCATTGATTCT-T 12980 Query 26482 AATCAAATAAGATTTTTCTAAAGTTTTCAATCCAAAATAATCATGATTGAAATCTCTTTT 26541 ||| ||||| ||| |||| || ||||| || |||||||||| || | ||||||||| | Sbjct 12981 AAT-AAATACGATCTTTCCAATGTTTTGAAACCAAAATAATTATATTGGAAATCTCTATC 13039 Query 26542 TTGTACTATAATTGAATCAAGAAATTCTCTATATTTTTCTACAA 26585 | || ||| || | || ||| ||| ||||||||||| Sbjct 13040 ATAAACAATAGCACTATTTAAAACATCTTTATTTTTTTCTACAA 13083 Score = 102 bits (112), Expect = 4e-17 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 24985 ATCTCTAATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGA 25044 |||||| | ||||| | ||| | || ||||| |||||||| |||||| | Sbjct 11504 ATCTCTTAGCAAGTATGGATTGACAATTTGGAATTCACCAGACAACGTTCTTCTAGAGTA 11563 Query 25045 TAAGTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGC 25104 | |||||||||||||||||| |||||||| || | || |||||||| || || ||||| Sbjct 11564 CATGTTTGAAGTGAATGGTTCGAAACATTCGTTGTAACCCAAGATTTGCGATGTTGATGC 11623 Query 25105 TGTTGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAAT 25155 |||||||||| || | ||| | || |||||||| ||| || ||||| Sbjct 11624 TGTTGGCATTGGAGCCAATAACAATGAGTTTCTCAATCCAGTTTCCACAAT 11674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039059402875