Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq82 226 3e-54 >seq82 Length=13639 Score = 226 bits (250), Expect = 3e-54 Identities = 512/764 (67%), Gaps = 18/764 (2%) Strand=Plus/Minus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | ||||| | || |||| || || || || ||||||| ||| ||||||| ||| Sbjct 12283 TGGTATGCTATCTTGGAAGCACAAACTGAAACAGGTACACCATTTATTGTTTACAAAGAT 12224 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 ||||||||||| || ||| ||||| ||||| ||||| ||||| || ||| | || Sbjct 12223 GCTTGTAACAAAAAATCTAATCAAAAAAATTTAGGAACTATCAAATCATCTAATTTGTGT 12164 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057 |||||| | || || ||||||| || || || |||||||| |||||||| || || Sbjct 12163 TGTGAAATTGTGGAATATTCAGATAACGACGAAACTGCTGTTTGTAATTTGGCTTCTATT 12104 Query 76058 GCCCTTCCAAAGTATGTCAATG------AAGAGACTCGC------ACTTTTGATTATGAA 76105 || | || | |||||| |||| || |||| ||||| || Sbjct 12103 GCTTTGCCCGCTTTCATCAATGTTTCAGAAGATGGTCAACAACAAACTTATGATTTCCAA 12044 Query 76106 AAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAAT 76165 ||| | || || | |||| | |||| | |||| | ||| ||||||||||||||||| Sbjct 12043 AAATTACACGATGTTGCAAAAGTCATTACAAGAAATTTGAACAGAGTCATTGACAGAAAT 11984 Query 76166 TTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGT 76225 | ||| || || || ||||| |||| || |||||| ||||||||||||||| | ||| Sbjct 11983 TATTACCCTGTGGAAACTGCAAGAAACTCAAATATGAGACACAGACCTATTGCCCTTGGT 11924 Query 76226 GTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCTACGCATTTGATTCAGATGAAGC 76284 ||||||||| | || ||| ||||| || || | | |||||||||| || |||| Sbjct 11923 GTTCAAGGTTTGGCTGATACTTTTATGCTTTTGAGAATTC-CATTTGATTCCGAACAAGC 11865 Query 76285 CAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTG 76344 ||| | ||||| || || || ||||| |||| || || | |||| | Sbjct 11864 CAAACAACTGAATATTCAAATTTTCGAAACATTGTACCATGCTGCATTGGAATCTTCAAA 11805 Query 76345 TGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGG 76404 ||| |||| | | ||||| | || | | || | ||||| || || || ||||| Sbjct 11804 CGAAATGGCCGTGGAAGAAGGTCCATACCAATCTTTCCAAGGTTCACCAGCTTCACAAGG 11745 Query 76405 GGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCA--ACTACGACTGGGATGTT 76462 || | || ||||| |||||||| | | |||| || | | || ||||| | Sbjct 11744 TGTTTTGCAATTTGACATGTGGGATAGAG-CTCCAA-CTGATTTGTGGGAATGGGAATCT 11687 Query 76463 CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCA 76522 | | ||| || ||| | || | | ||| | || |||| ||||||||| Sbjct 11686 TTGAGAGAAAAAATTGTGGAAACTGGATTGAGAAACTCATTGTTATTGGCTCCAATGCCA 11627 Query 76523 ACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAAC 76582 ||||| || || | |||||||||||| | || ||||| || ||||||| ||| ||||| Sbjct 11626 ACAGCATCAACATCGCAAATCTTGGGTTACAACGAATGTTTCGAACCATTCACTTCAAAC 11567 Query 76583 ATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAA 76626 || ||| |||||||| | | ||||| || |||||||| Sbjct 11566 ATGTACTCTAGAAGAACGTTGTCTGGTGAATTCCAAATTGTCAA 11523 Score = 84.2 bits (92), Expect = 3e-11 Identities = 235/358 (66%), Gaps = 2/358 (1%) Strand=Plus/Minus Query 75222 TGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACAT 75281 || ||||| | || || |||| || || || ||| ||||| |||||||| || | Sbjct 12942 TGATCATGAGAGTTGCTGTCGGGATTCATGGTTCAGATATTGAAAAAGTCTTGGAAACTT 12883 Query 75282 ACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGT 75340 | | |||||| || ||| |||| || ||| | ||||| | ||||||||||| Sbjct 12882 ATAATTTGATGTCTTTGAGATAT-TTCACACATGCATCTCCAACTTTATTCAATGCTGGA 12824 Query 75341 ACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAAC 75400 ||||||||||| || ||||| || |||||| | || | || || || || || | Sbjct 12823 ACACCAAGACCTCAAATGTCTTCATGTTTCCTTGTTGCTATGAAAGACGATTCCATTGAT 12764 Query 75401 GGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGG 75460 ||||| |||| ||| | | || ||||| || || || ||||| |||||||| Sbjct 12763 GGTATTTATGATACTTTAAAAGAATGTGCTTTGATTTCTAAAACTGCTGGTGGTATTGGT 12704 Query 75461 ATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCA 75520 | || || ||| || | ||| | | ||| |||| || || ||||| || Sbjct 12703 CTTCATATTCATAATATTAGATCAACCGGTTCTTATATTGCAGGTACTAATGGGACTTCT 12644 Query 75521 GATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAG 75578 |||| | ||||||||| || | || || || || || | ||||| |||||| Sbjct 12643 AATGGATTGATTCCAATGATTAGAGTTTTCAATAATACTGCAAGATATGTTGATCAAG 12586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567325578400