Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq230 152 9e-32
seq182 150 3e-31
seq70 132 9e-26
>seq230
Length=21327
Score = 152 bits (168), Expect = 9e-32
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||||||||||| | |||| || | || | ||||| ||| || ||||| ||
Sbjct 13666 ACCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGA 13607
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| |||||| ||| || |||||||| || ||||| || ||||| ||||| ||||| ||
Sbjct 13606 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 13547
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| |||||||| ||||| ||||||| ||| | || || || ||||| || || ||
Sbjct 13546 AATACCTTCTTTGTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGAC 13487
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAA 193351
||||||||| ||||| ||||| |||| ||||| |||||
Sbjct 13486 TTCTAGAGTGATAGTCTTACCAGTTAAGGTTTTGACAAA 13448
>seq182
Length=55006
Score = 150 bits (166), Expect = 3e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||||||||||| | |||| || | || | ||||| ||| || ||||| ||
Sbjct 1893 ACCACCTCTCAATCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGA 1834
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| |||||| ||| || |||||||| || ||||| || ||||| ||||| ||||| ||
Sbjct 1833 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 1774
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| |||||||| ||||| ||||||| ||| | ||| ||| || || || || || ||
Sbjct 1773 GATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGAC 1714
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||| | || || ||||||||||| | ||||| || || |||||||| ||
Sbjct 1713 TTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTT 1663
>seq70
Length=20209
Score = 132 bits (146), Expect = 9e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||||||||||| | |||| || | || | ||| || || || ||||||||
Sbjct 19577 ACCACCTCTCAATCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGA 19636
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|||||||| || || || ||||| || |||||||| ||||| ||||| ||||| ||
Sbjct 19637 CAACGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGG 19696
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| |||||||| || || || |||| || | || || || || || || |||||
Sbjct 19697 AATCCCTTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAAC 19756
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||| | ||| || ||||| || || | ||||| ||||| |||||||||||
Sbjct 19757 TTCCAAAGTGATGGTTTTCCCAGTCAAAGTTTTAACAAAAATTTGCATTTT 19807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899650970067600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |