Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq140 297 3e-75
seq182 150 3e-31
seq70 141 1e-28
seq230 129 9e-25
>seq140
Length=127049
Score = 297 bits (328), Expect = 3e-75
Identities = 581/847 (69%), Gaps = 16/847 (2%)
Strand=Plus/Plus
Query 17861 GCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATT 17920
||||||| || || ||| |||| || |||||||| || || ||| | ||||| ||
Sbjct 6248 GCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGCTAATGAAATA 6307
Query 17921 AAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATTAATTCGTAT 17980
| |||||||||||||||||| | |||||||||||||| | |||| |
Sbjct 6308 TTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCATTACCTAATGCAACC 6367
Query 17981 AATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTAGT 18040
||||||||||| || |||||||| |||||||| |||||| | ||||||||||| |
Sbjct 6368 AATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATTCATACCTAAT 6427
Query 18041 AGTCTGAAAGGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTTATT 18100
| | ||| | ||||| || | || ||| || || ||||| || | ||
Sbjct 6428 AAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACAGCTTCAGTAATA 6487
Query 18101 ATGTTTATTACCCTAGATTTTGGCAATTTATTAATTATGTGATTATA-ATATAATAAACA 18159
|| || | | | |||||| | | | || ||| | | | | | |||||| |||
Sbjct 6488 ATTCTT-TCAGC---GATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAATAATAGACA 6543
Query 18160 CGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAACCC 18219
|||||||||||||||| ||||||||||| | || ||||| || ||| || || ||
Sbjct 6544 TGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTCAAACC 6603
Query 18220 GGGCATTATACCTCttttt-tttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAATA 18278
||||| | ||| |||||| |||| |||||| || | || || || |||||||| |
Sbjct 6604 TGGCATCA-ACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAAAAGAAAA 6662
Query 18279 TACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAA-ACTGTATTTATTGCTCAG 18336
||| ||||| ||| || || || | |||||||||||||| | || || | || |
Sbjct 6663 CACCTTCAACAGCA-GCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCATCT-TG 6720
Query 18337 TATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATT 18396
|||||| | |||||||| ||| || || ||| | || ||||||||
Sbjct 6721 AATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATAGCATT 6780
Query 18397 AAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACAT 18456
||||| || ||||||| | |||||| |||||||| ||||| || | ||||| |
Sbjct 6781 GAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGCGAATATGT 6840
Query 18457 TTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATA 18516
|||| ||| || ||||||| || || || | ||||| || |||| || |||
Sbjct 6841 TTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTCTGGAAT 6900
Query 18517 TTGAATCTC-GCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATG 18575
|| | || || | |||| | || |||||||||||||| || || || || | || |
Sbjct 6901 CTGCACTTCAGCACTGAAAT-TCTCCACCAAATTCTCATTGACAATCCCATCTGAAGCAG 6959
Query 18576 CGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA---GATTGTTCC 18632
|||||||||| ||||| |||||||| | ||||||| || || | ||| ||||
Sbjct 6960 CGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTATTATTCC 7019
Query 18633 ATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCCT 18692
| || | |||||||| || ||||| | |||||| | |||||||| || | ||| ||
Sbjct 7020 AGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGCTTCAGCAC 7079
Query 18693 GTTTGTA 18699
|||||||
Sbjct 7080 GTTTGTA 7086
>seq182
Length=55006
Score = 150 bits (166), Expect = 3e-31
Identities = 177/238 (74%), Gaps = 1/238 (0%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| |||||||| || ||||||| ||||| || ||||| ||||| || |||||||||
Sbjct 1663 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCC 1722
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
||||| | ||| || || ||| ||||| ||||| |||||||| || || || ||
Sbjct 1723 TCTGACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTGAC 1782
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||| | ||| ||||| || | |||||| |||||||| || || ||
Sbjct 1783 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 1842
Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT-GTAAAA 156056
|| || ||||| | || ||||| || || || ||||| ||||| ||| ||||||
Sbjct 1843 AACATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGGTGGTAAAA 1900
>seq70
Length=20209
Score = 141 bits (156), Expect = 1e-28
Identities = 173/234 (74%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
||||||||||| ||| ||||||| |||||||| ||||| || || || ||||| |||
Sbjct 19807 AAAATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCC 19748
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|| || | || ||||| || || || || || |||||||| || || || ||
Sbjct 19747 TCAGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGAC 19688
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||||| ||| ||||| ||| | ||||| |||||| || || || ||
Sbjct 19687 CAACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCGACTAC 19628
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| | ||||||| ||| |||| || || || || || ||||| ||||| ||||
Sbjct 19627 A--ACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGGTG 19576
>seq230
Length=21327
Score = 129 bits (142), Expect = 9e-25
Identities = 161/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891
||| | ||||| || ||||| || ||||| || ||||||||||| || || | ||
Sbjct 13448 TTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCATC 13507
Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951
||||| ||| ||||| ||||| |||||||| || || || || ||||||||||||
Sbjct 13508 GATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 13567
Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011
|| | ||| ||||| || | |||||| |||||||| || || || || || |||
Sbjct 13568 ATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 13627
Query 156012 GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTGT 156052
|| | || ||||| || || || ||||| ||||| |||||
Sbjct 13628 GAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGGTGT 13668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731869209738000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |