Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq140 246 6e-60
seq230 165 2e-35
seq182 150 4e-31
seq70 132 9e-26
>seq140
Length=127049
Score = 246 bits (272), Expect = 6e-60
Identities = 527/788 (67%), Gaps = 18/788 (2%)
Strand=Plus/Plus
Query 49573 CTTCTAATGATATTAAATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTC 49632
|| ||||||| || | ||||||||||||||||||| |||||||||||||||
Sbjct 6294 CTGCTAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCAT 6353
Query 49633 CTATC-AATACATATAATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCA 49691
|| | ||| || ||||||||||| || ||||||||||||||||| ||| ||| ||
Sbjct 6354 -TACCTAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCA 6412
Query 49692 CAATTCATACCCAATAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttct 49751
||||||||| ||||| || || |||||||| |||| | || |||||| ||
Sbjct 6413 GCATTCATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAA 6472
Query 49752 acagcttgtttaattatcataattatattattttttgataa--tttatatttaatatgat 49809
||||||| |||| || | || |||||| ||| ||||| || | ||| |
Sbjct 6473 ACAGCTTCAGTAATAATTCT--TTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTT 6530
Query 49810 tcgcatatattaaACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCAT 49869
| ||| || ||||||||||||||| |||| || || || ||| | || |||||||
Sbjct 6531 G---AAATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCAT 6587
Query 49870 TACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAAC 49929
| |||||| || |||||||| || || | || || | |||||| |||| |||||
Sbjct 6588 TTGAAAAAGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATG 6647
Query 49930 TACTAGAAAAGAATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTA 49989
|| |||||||| | ||| || ||| |||||||| | | |||| | |||| | |
Sbjct 6648 AACCGGAAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATG 6707
Query 49990 ATTTATCATCTAATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATAT 50049
| |||||| ||||| | |||||||| || ||||||| |||||| || |||
Sbjct 6708 CATCTTCATCTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAG 6767
Query 50050 TTTCTATAGCTTT---AAATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNA 50106
|||| ||||| || || |||||| |||| | |
Sbjct 6768 TTTCAATAGCATTGAACAAGAATTCA---CTTTCTTTTGGATCTTTGATATAAGTATCGA 6824
Query 50107 TTAATAAAGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATT 50166
| || | ||||| ||||| ||| | | |||||| ||||| || |||||
Sbjct 6825 TCAAAAGCGAATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAAC 6884
Query 50167 GTCTTGCTTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAA 50226
| | ||||||| | ||| ||||| | | ||| || || ||||||||| ||||
Sbjct 6885 ATTTAGCTTCTGGAATCTGCACTTCAGCACTGAAATTCTCCACCAAATTCTCATTGACAA 6944
Query 50227 TACCATCAGATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTT 50286
| ||||| || || ||||| ||||||||||| |||| ||| | ||||||| || |
Sbjct 6945 TCCCATCTGAAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCAT 7004
Query 50287 ---TTAAATTTTCCCAAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAA 50343
|| ||| | ||| | | ||| || || | ||| | ||||||| |||||||
Sbjct 7005 TCATTCTATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAA 7064
Query 50344 ATGATGCT 50351
|||| |||
Sbjct 7065 ATGAAGCT 7072
>seq230
Length=21327
Score = 165 bits (182), Expect = 2e-35
Identities = 174/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||||| ||||||||| | | || || || || | ||| | ||||| || |
Sbjct 13676 GTTCAATAACACCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGT 13617
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
| || ||||| || |||| |||| ||||||||||||||||||||||| ||||| ||||
Sbjct 13616 TGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTT 13557
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
| |||||||| || |||||||| ||||| ||||| ||| || ||| || | || |
Sbjct 13556 GGTCAGGTGGAATACCTTCTTTGTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGG 13497
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527
| ||||| ||||||||||| || || ||||||||||| ||||| | |||
Sbjct 13496 AGGATTCGACTTCTAGAGTGATAGTCTTACCAGTTAAGGTTTTGACAAA 13448
>seq182
Length=55006
Score = 150 bits (166), Expect = 4e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | || || || || | || | ||||| || || || |||||
Sbjct 1893 ACCACCTCTCAATCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGA 1834
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|| |||| |||| ||||||||||||||||||||||| ||||| ||||| ||||||||
Sbjct 1833 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 1774
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| |||||||| ||||| ||||| ||| ||||| || | || || ||||| ||
Sbjct 1773 GATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGAC 1714
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
||| | |||||||||||||| || || ||||||| || || ||||| ||
Sbjct 1713 TTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTT 1663
>seq70
Length=20209
Score = 132 bits (146), Expect = 9e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | || || || || | || | ||| || ||| || || || ||
Sbjct 19577 ACCACCTCTCAATCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGA 19636
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|| |||| | || ||||| |||||||||||||| || ||||| ||||| ||||||||
Sbjct 19637 CAACGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGG 19696
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| |||||||| || || || || || || || || | ||||| ||||| ||
Sbjct 19697 AATCCCTTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAAC 19756
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
||| | ||| |||||||| ||||| || ||||||| ||| || ||||||||
Sbjct 19757 TTCCAAAGTGATGGTTTTCCCAGTCAAAGTTTTAACAAAAATTTGCATTTT 19807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984476152836750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |