Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq82 284 4e-71
seq176 111 5e-19
seq104 102 2e-16
seq101 96.9 1e-14
>seq82
Length=13639
Score = 284 bits (314), Expect = 4e-71
Identities = 659/988 (67%), Gaps = 19/988 (2%)
Strand=Plus/Plus
Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646
||||||| |||| |||||| || ||||| || | || || ||||| ||||| ||||
Sbjct 12103 CAATAGAAGCCAAATTACAAACAGCAGTTTCGTCGTTATCTGAATATTCCACAATTTCAC 12162
Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706
| |||| ||||| ||||| || |||||||| || || |||||||| |||||||||
Sbjct 12163 AACACAAATTAGATGATTTGATAGTTCCTAAATTTTTTTGATTAGATTTTTTGTTACAAG 12222
Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCC 155766
|||| ||||| | ||| |||| || ||||| || | ||||| |||| || ||
Sbjct 12223 CATCTTTGTAAACAATAAATGGTGTACCTGTTTCAGTTTGTGCTTCCAAGATAGCATACC 12282
Query 155767 AGAGGTCACGGGCATTAATTTGCTTGTTGTA--TCTGCCTTCCGACTCATATTTCATATA 155824
| | | | || ||||| || || || ||| ||||| || ||||| | | ||
Sbjct 12283 ATAATTTTTGTGCTTTAATAG--TTTTTCTACCTCTTCCTTCTGAAACATATCTATTGTA 12340
Query 155825 CAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG----CACTTATCGGGGC 155880
|| || |||| |||| ||| |||||| | || || ||||| ||
Sbjct 12341 CAATTTTTCAAAATCTGCACCATAAACATCACTTAAACCTGGAGCTTCACTT----GGAG 12396
Query 155881 AAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAA 155940
|||||| | |||| | ||| | | || | |||||||| ||| |||| |
Sbjct 12397 AAAACAATGTCCAATCTGAATTTTCTTTAACTTTTTGCATAAATAAATCTGGAACCCATA 12456
Query 155941 TAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTA 156000
||| || | || ||||| | || || | || ||||| ||||| | || |
Sbjct 12457 ATGCAGGAAACAAATCTCTTGCTCTAATTTCTTCTTTACCATGATTTTTCCGAATATCAA 12516
Query 156001 AGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCT 156060
|| || ||||||| ||| ||| || | ||| | ||||||| |||| || |
Sbjct 12517 TAAAATCAAAAATATCACTATGCCATGGTTCTAAATAAAGAGCAAAAGCACCAGGTCTTT 12576
Query 156061 TG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAA 156117
| ||||| ||||| ||||| | ||||| |||||||| || | | ||| ||||| |
Sbjct 12577 TATTACCACCTTGATCAACATATCTTGCAGTATTATTGAAAACTCTAATCATTGGAATCA 12636
Query 156118 TACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAA 156177
||||| ||||| ||||| || || ||||| ||||| | ||| | || ||||||||
Sbjct 12637 ATCCATTAGAAGTCCCATTAGTACCTGCAATATAAGAACCGGTTGATCTAATATTATGAA 12696
Query 156178 TATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGA 156237
|||| || ||||||||||| | ||||||||| ||| ||||| |||| |||||
Sbjct 12697 TATGAAGACCAATACCACCAGCAGTTTTAGAAATCAAAGCACATTCTTTTAAAGTATCAT 12756
Query 156238 AAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTC 156297
||||||| ||||| ||||| |||| ||| | | || | || ||| | ||||||||
Sbjct 12757 AAATACCATCAATGGAATCGTCTTTCATAGCAACAAGGAAACATGAAGACATTTGAGGTC 12816
Query 156298 GTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATAT 156357
|||||||||||| ||||||| || || | |||||| | ||||| | ||||||
Sbjct 12817 TTGGTGTTCCAGCATTGAATAAAGTTGGAGATGCATGTGTGAAATATCTCAAAGACATCA 12876
Query 156358 AATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCA 156417
||| || || ||| | || |||| || || || ||||| | || || || ||||
Sbjct 12877 AATTATAAGTTTCCAAGACTTTTTCAATATCTGAACCATGAATCCCGACAGCAACTCTCA 12936
Query 156418 TCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTT 156477
| || ||| ||||| | || |||| ||||| |||| | | || | | ||
Sbjct 12937 TGATCAAATGTTGAGGTCTTTCAGCAATTTGTCCATTGATTCTTAATAAATACGATCTTT 12996
Query 156478 CCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAATCAAT--CATTTC 156535
||| ||||| || || ||||||| | | | ||||| | | ||| |||| || |
Sbjct 12997 CCAATGTTTTGAAACCAAAATAATTATATTGGAAATCTCTATCATAAACAATAGCACT-- 13054
Query 156536 ATCTAACTCAACCTGATATTTTTCCACA 156563
|| ||| || | | || |||||| |||
Sbjct 13055 ATTTAAAACATCTTTATTTTTTTCTACA 13082
>seq176
Length=99452
Score = 111 bits (122), Expect = 5e-19
Identities = 332/499 (67%), Gaps = 15/499 (3%)
Strand=Plus/Plus
Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909
|| ||||| || |||| | | || ||| || || || || |||||||| || ||
Sbjct 8009 CTGTCAAATCTTCCAGGTCTCATCAAAGCTTTATCCAAAATGTCCGCTCTGTTGGTACCT 8068
Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAA-ATTTGATT 288968
||||| |||||||| ||| | | | || || |||| | | || | |||||
Sbjct 8069 GCCAAAACAACAATGTGTTCAGACGGAGTGAACCCGTCCA-ATTCAACAAGCAACTGATT 8127
Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttttt 289028
| ||| ||| ||||| || ||||| |||| || ||| | | ||| || |||
Sbjct 8128 CAATGTGGTTTCTCTTTCTTCGTTTGAGTTGCTTGCATTACC--ACTTCCTC-TTGCTTT 8184
Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088
||||| ||||| ||||| ||||||||||| | ||| || | || |||||| ||
Sbjct 8185 ACCAATGGCATCGATTTCATCAATGAAAATGATACATGGGGCGTTCATTCTCGCGGTTTT 8244
Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148
|| || ||||| || | || || |||| ||||||| ||||||| ||||| || || |
Sbjct 8245 GAACAAGTCTCTGACTCTTGAAGCACCAACACCAACAAACATTTCAACAAACTCGGACCC 8304
Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208
|| || | |||| ||| ||||| || || || | |||| | |||||
Sbjct 8305 AGAAACAGAGAAAAATGGAACACCGGCTTCACCGGCAGTAGCTTTAGCCAACAAAGTCTT 8364
Query 289209 ACCTGTTCCAGGTGGTCC-CTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACT 289267
|| || || || || || ||| || | | | || |||| | ||| || ||| || |
Sbjct 8365 CCCGGTACCTGGGGGACCACTC-AAAATAGCACCTCTTGGAATTTTGGCACCA--AGTTT 8421
Query 289268 T--ATATTTCTCAGGGCTCTTT--AAAAATTCTACAATTTCCTCAAGTTCATATTTTGCC 289323
| ||||||| || | ||| |||||||| |||| ||| || ||| | ||||||
Sbjct 8422 TTCGTATTTCT-TTGGATGTTTCAAAAAATTC-ACAAACTCCATAATTTCTTCTTTTGCT 8479
Query 289324 TCATCACATCCTGCTACAT 289342
|||||||| ||||| ||||
Sbjct 8480 TCATCACAACCTGCAACAT 8498
>seq104
Length=202723
Score = 102 bits (112), Expect = 2e-16
Identities = 316/479 (66%), Gaps = 24/479 (5%)
Strand=Plus/Minus
Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTT-AAA 288941
|| || ||||| ||||| ||||| | ||||| |||| || |||| |||| || |||
Sbjct 37646 TCCAAAATATCTGCTCTATTTGTCCCAGCCAAAACAATGATTTGTTCG-TTTGTTTCAAA 37588
Query 288942 TCCATCCATACTTGTTAAAATTTGATT--AAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999
|| ||||| || | || || ||||| || || ||||| ||||||| ||||
Sbjct 37587 ACCGTCCATTTCCACTAGCAACTGGTTCAAAGTGCTT--TCTCTTTCGTCATTTGCACCT 37530
Query 289000 CTTGAATC------ACCC----GAATCGCTCCttt--ttttACCAACAGCATCAATTTCG 289047
| ||| | ||| | || | ||| | || | |||| ||||||||| ||
Sbjct 37529 CCAGAACCCATACCACCGCCTTGTTTCCCGCCTCTGCTTCTCCCAATAGCATCAATCTCA 37470
Query 289048 TCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGG 289107
||||||||||| | || |||| ||| | || | ||||| || || | ||| |
Sbjct 37469 TCAATGAAAATAATGCATGGAGTCATTTCCCGAGCTTTGGCAAACAAGTCCCGTACTCTC 37410
Query 289108 GATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTT 289167
||||| |||| ||| ||| ||||||| ||||| ||||| |||| || | ||| |
Sbjct 37409 GATGCACCAACACCTACAAACATTTCCACAAACTCAGACCCGGAAACCGACAAGAAGGGA 37350
Query 289168 ACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCC- 289226
|| |||||| || || || | |||| | || || ||||| || || |||||
Sbjct 37349 ACTCCTGCTTCTCCCGCAGTGGCTTTGGCCAACAACGTTTTCCCTGTACCTGGAGGTCCA 37290
Query 289227 CTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACT--TATATTTCTCAGGGCTC 289284
||| || | | || |||| | ||||| | || | || | || ||||| ||
Sbjct 37289 CTC-AAAATGGCGCCTCTTGGAA--TTTGCGCTCCCAATTTGGTAAACTTTTCAGGAGTC 37233
Query 289285 TTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343
|| ||||| || |||| |||| || ||| | |||||||| || || ||||| || ||
Sbjct 37232 TTCAAAAACTCAACAAATTCCATAATTTCTTGCTTTGCCTCGTCGCACCCTGCCACGTC 37174
>seq101
Length=71874
Score = 96.9 bits (106), Expect = 1e-14
Identities = 176/254 (69%), Gaps = 4/254 (2%)
Strand=Plus/Plus
Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612
|||||| || |||||| ||||||| | |||| ||||| | ||||||||||||||
Sbjct 53658 ATCATAGTGAACCATAATATCTTCCAAAGCTTTGACCAAACGTCTTTGAATATAACCAGT 53717
Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672
| || |||||| ||||| |||||||||| || | | ||| |||||||| || |||||
Sbjct 53718 TTCAGCTGTTTTCACAGCAGTATCAATTAACCCTTCTCTACCTCCCATAGCGTGAAAGAA 53777
Query 302673 TAGCTCTTCCGGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCG 302730
| |||| ||| || | || | ||| | | ||| |||| || ||||| | ||
Sbjct 53778 AAATTCTTGTGGT-GTCAAACCTCTCAA-ATATGAGTTCTCCACAAAACCTTTAGATTCA 53835
Query 302731 GGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATA 302790
|| || | ||| |||| || ||||| | || || | || | || |||| |||
Sbjct 53836 GGAGAGTAATCGTCTTTGGAGAAATGTGGTAAAGTTCTATCAGCAAACCCAAATGGAATA 53895
Query 302791 CGCTTTCCATCAAC 302804
|| || || |||||
Sbjct 53896 CGTTTACCTTCAAC 53909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471811848412785
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |