Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq230 159 3e-34
seq182 159 3e-34
seq70 140 3e-28
seq82 96.9 3e-15
>seq230
Length=21327
Score = 159 bits (176), Expect = 3e-34
Identities = 176/232 (76%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 24713 TTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTA 24772
||| | ||||| |||| ||||| ||||| || || ||||| ||| || ||||||| |
Sbjct 13448 TTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCATC 13507
Query 24773 GA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTT 24831
|| |||| ||| | ||| ||||||||||||||||| || || || || |||||| | ||
Sbjct 13508 GATAACGTCAAAGCCAAA-ATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 13566
Query 24832 GATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAA 24891
||||||||| || ||||| |||| ||| |||| |||| || || |||||||||||
Sbjct 13567 GATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAA 13626
Query 24892 GGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCCA 24943
||||| || || |||||||| ||| ||||| | || || | | ||| |||
Sbjct 13627 AGAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGGTGTTATTGAACCA 13678
>seq182
Length=55006
Score = 159 bits (176), Expect = 3e-34
Identities = 176/232 (76%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| || || ||||||| | || |||||||| ||||| | ||||| ||| || |
Sbjct 1665 GATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCCTC 1724
Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
||||| | || || | |||| | ||| ||||||||||||||||| || || || || |
Sbjct 1725 TGACACCATTGACAATGTTAAAGCCAAA-ATCCAAGACAAAGAAGGTATCCCACCTGACC 1783
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
||||| | ||||||||||| || ||||| |||| ||| |||| |||| || || |
Sbjct 1784 AACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACA 1843
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933
|||||||||| ||||| || || |||||||| ||| ||||| | || || ||
Sbjct 1844 ACATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGGTGG 1895
>seq70
Length=20209
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || ||| ||||||| | || || ||||| || || | ||||| ||| || |
Sbjct 19804 ATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCCTCA 19745
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||||||||| || || || || |||
Sbjct 19744 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGACCAA 19685
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | ||||| ||||| || |||||| |||| || |||| |||| || || |||
Sbjct 19684 CAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCGACTACAAC 19625
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| |||||||| ||||| || |||||||| ||| ||||| | || ||
Sbjct 19624 ATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 19578
>seq82
Length=13639
Score = 96.9 bits (106), Expect = 3e-15
Identities = 92/118 (78%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 139123 TATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTG 139182
||||| |||||||| |||||||||| | ||||| || |||||||||| ||||||
Sbjct 12147 TATTCCACAATTTCACAACACAAATTAGATGATTTGATAGTTCCTAAATTTTTTTGATTA 12206
Query 139183 CTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTG 139240
|||| |||||||||||||||||||| ||| | ||||| || ||||| |||||
Sbjct 12207 GATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGTACCTGTTTCAGTTTGTG 12264
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449895884765400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |