Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq182 120 3e-22
seq70 116 3e-21
seq230 100 2e-16
>seq182
Length=55006
Score = 120 bits (132), Expect = 3e-22
Identities = 178/250 (71%), Gaps = 7/250 (3%)
Strand=Plus/Plus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCC 110328
|| |||||||| || || |||||||| || || |||||||||||| | ||| || | ||
Sbjct 1663 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCC 1722
Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388
| || || | | | | || ||| || || ||||||||||| | || ||
Sbjct 1723 TCT-GACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTGA 1781
Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448
||||||||| | || | ||| |||||||| |||| |||| ||||| || | || ||
Sbjct 1782 CCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTA 1841
Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG-----AAAA 110503
|||||||||||||||||| || | ||| |||| || ||| || |||| || ||||
Sbjct 1842 CAACATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGGTGGTAAAAA 1901
Query 110504 AATAAATAAG 110513
|| ||| |||
Sbjct 1902 AAGAAAGAAG 1911
>seq70
Length=20209
Score = 116 bits (128), Expect = 3e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG-CC 110328
||||||||||| ||||| |||||||| || || |||||||| || | ||| || ||
Sbjct 19807 AAAATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCC 19748
Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388
| | || || ||| | | || || ||||| ||||||||||| | || ||
Sbjct 19747 TCA-GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGA 19689
Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448
||||||||| | |||| ||| ||||||||| |||| || | |||||| || | || ||
Sbjct 19688 CCAACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCGACTA 19629
Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||| ||||| || || || | ||| |||| || ||| || |||| ||
Sbjct 19628 CAACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 19578
>seq230
Length=21327
Score = 100 bits (110), Expect = 2e-16
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 110282 TTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTGACGATACTGT 110340
||||||||||| ||||| || || || || || | ||| || | ||| ||| || |
Sbjct 13448 TTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTC-CGACACCAT 13506
Query 110341 CGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACT 110400
|| | || ||| || || ||||||||||| | || || ||||||||| |
Sbjct 13507 CGATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 13566
Query 110401 TATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAA 110460
|| | ||| |||||||| |||| |||| ||||| || | || ||||||||||||||
Sbjct 13567 GATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAA 13626
Query 110461 AGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||| || | ||| |||| || ||| || |||| ||
Sbjct 13627 AGAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 13665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412840065390365
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |