Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq182 120 3e-22 seq70 116 3e-21 seq230 100 2e-16 >seq182 Length=55006 Score = 120 bits (132), Expect = 3e-22 Identities = 178/250 (71%), Gaps = 7/250 (3%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCC 110328 || |||||||| || || |||||||| || || |||||||||||| | ||| || | || Sbjct 1663 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCC 1722 Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388 | || || | | | | || ||| || || ||||||||||| | || || Sbjct 1723 TCT-GACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTGA 1781 Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448 ||||||||| | || | ||| |||||||| |||| |||| ||||| || | || || Sbjct 1782 CCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTA 1841 Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG-----AAAA 110503 |||||||||||||||||| || | ||| |||| || ||| || |||| || |||| Sbjct 1842 CAACATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGGTGGTAAAAA 1901 Query 110504 AATAAATAAG 110513 || ||| ||| Sbjct 1902 AAGAAAGAAG 1911 >seq70 Length=20209 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG-CC 110328 ||||||||||| ||||| |||||||| || || |||||||| || | ||| || || Sbjct 19807 AAAATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCC 19748 Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388 | | || || ||| | | || || ||||| ||||||||||| | || || Sbjct 19747 TCA-GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGA 19689 Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448 ||||||||| | |||| ||| ||||||||| |||| || | |||||| || | || || Sbjct 19688 CCAACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCGACTA 19629 Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||| ||||| || || || | ||| |||| || ||| || |||| || Sbjct 19628 CAACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 19578 >seq230 Length=21327 Score = 100 bits (110), Expect = 2e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 110282 TTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTGACGATACTGT 110340 ||||||||||| ||||| || || || || || | ||| || | ||| ||| || | Sbjct 13448 TTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTC-CGACACCAT 13506 Query 110341 CGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACT 110400 || | || ||| || || ||||||||||| | || || ||||||||| | Sbjct 13507 CGATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 13566 Query 110401 TATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAA 110460 || | ||| |||||||| |||| |||| ||||| || | || |||||||||||||| Sbjct 13567 GATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAA 13626 Query 110461 AGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||| || | ||| |||| || ||| || |||| || Sbjct 13627 AGAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 13665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840065390365