Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq182 134 2e-26 seq230 123 4e-23 >seq182 Length=55006 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | ||||| || ||||| ||||| ||||| | || || ||| | Sbjct 1667 TGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCCTCTG 1726 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| ||| ||||| ||| |||||||| || ||||| || |||| Sbjct 1727 ACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTGACCAAC 1786 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | || ||||| ||||||||||| || ||| |||||| || | || || || | Sbjct 1787 AAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACA 1846 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258 | ||||||||||| || | || || || || |||| ||||| ||| Sbjct 1847 TTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGGT 1893 >seq230 Length=21327 Score = 123 bits (136), Expect = 4e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAAT 146105 ||||| ||||| || || || || ||| | || || ||| ||| || || | || Sbjct 13454 AAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCATCGATAAC 13513 Query 146106 GTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTT 146165 || ||| ||||| ||| |||||||| |||||||| || ||||||||| | || ||| Sbjct 13514 GTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTGATCTTT 13573 Query 146166 GCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCG 146225 || ||||||||||| || ||| |||||| || | || || || || ||||||||||| Sbjct 13574 GCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAAGAATCC 13633 Query 146226 ACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258 ||| | || || || || |||| ||||| ||| Sbjct 13634 ACTCTTCACTTGGTCTTGAGATTGAGAGGTGGT 13666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786163402740600