Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq182 134 2e-26
seq230 123 4e-23
>seq182
Length=55006
Score = 134 bits (148), Expect = 2e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | ||||| || ||||| ||||| ||||| | || || ||| |
Sbjct 1667 TGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCCTCTG 1726
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| | ||||| ||| ||||| ||| |||||||| || ||||| || ||||
Sbjct 1727 ACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTGACCAAC 1786
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | || ||||| ||||||||||| || ||| |||||| || | || || || |
Sbjct 1787 AAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACA 1846
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258
| ||||||||||| || | || || || || |||| ||||| |||
Sbjct 1847 TTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGGT 1893
>seq230
Length=21327
Score = 123 bits (136), Expect = 4e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAAT 146105
||||| ||||| || || || || ||| | || || ||| ||| || || | ||
Sbjct 13454 AAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCATCGATAAC 13513
Query 146106 GTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTT 146165
|| ||| ||||| ||| |||||||| |||||||| || ||||||||| | || |||
Sbjct 13514 GTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTGATCTTT 13573
Query 146166 GCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCG 146225
|| ||||||||||| || ||| |||||| || | || || || || |||||||||||
Sbjct 13574 GCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAAGAATCC 13633
Query 146226 ACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258
||| | || || || || |||| ||||| |||
Sbjct 13634 ACTCTTCACTTGGTCTTGAGATTGAGAGGTGGT 13666
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786163402740600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |