Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq82 289 7e-73
seq140 163 7e-35
seq101 113 1e-19
seq166 91.5 3e-13
>seq82
Length=13639
Score = 289 bits (320), Expect = 7e-73
Identities = 582/860 (68%), Gaps = 5/860 (1%)
Strand=Plus/Minus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
||||||||||||||||| | ||| | | |||||| | | ||||||| | || |
Sbjct 13018 TATTTTGGTTTCAAAACATTGGAAAGATCGTATTTATTAAGAATCAATGGACAAATTGCT 12959
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
||| | |||||||| || | | | ||||| | || |||||||| |||||| ||
Sbjct 12958 GAAAGACCTCAACATTTGATCATGAGAGTTGCTGTCGGGATTCATGGTTCAGATATTGAA 12899
Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCT-ATTCATGCTACTCCTAC 110482
|| | ||| |||| || | | | | || | | | ||||| |||| ||
Sbjct 12898 AAAGTCTTGGAAACTTATAATTTGATGTCTTTGA-GATATTTCACACATGCATCTCCAAC 12840
Query 110483 CCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAA 110542
|||| || || ||||| || ||| || |||| || || ||| | | || ||
Sbjct 12839 TTTATTCAATGCTGGAACACCAAGACCTCAAATGTCTTCATGTTTCCTTGTTGCTATGAA 12780
Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAA 110602
|| ||||| ||||| |||||||||||| || | |||||| |||| | ||||||||||
Sbjct 12779 AGACGATTCCATTGATGGTATTTATGATACTTTAAAAGAATGTGCTTTGATTTCTAAAAC 12720
Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662
|||| || |||||| |||| ||||| ||||| | |||| || | |||| |||
Sbjct 12719 TGCTGGTGGTATTGGTCTTCATATTCATAATATTAGATCAACCGGTTCTTATATTGCAGG 12660
Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722
| || || |||| | |||| | |||||||| | ||||| ||||| | |||||||
Sbjct 12659 TACTAATGGGACTTCTAATGGATTGATTCCAATGATTAGAGTTTTCAATAATACTGCAAG 12600
Query 110723 ATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTG 110779
|||||| |||||||||| ||| ||| ||| | |||||| | ||| | ||||| ||
Sbjct 12599 ATATGTTGATCAAGGTGGTAATAAAAGACCTGGTGCTTTTGCTCTTTATTTAGAACCATG 12540
Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAG 110839
|||| ||||| ||||| || | || |||| |||||||| || |||||| ||
Sbjct 12539 GCATAGTGATATTTTTGATTTTATTGATATTCGGAAAAATCATGGTAAAGAAGAAATTAG 12480
Query 110840 AGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGA 110899
|||| | ||||| ||| |||| | ||| || |||||||||| ||| || ||| ||||
Sbjct 12479 AGCAAGAGATTTGTTTCCTGCATTATGGGTTCCAGATTTATTTATGCAAAAAGTTAAAGA 12420
Query 110900 AAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGG 110959
|||| ||| | | | | ||| | |||| ||| || |||||| |||||
Sbjct 12419 AAATTCAGATTGGACATTGTTTTCTCCAAGTGAAGCTCCAGGTTTAAGTGATGTTTATGG 12360
Query 110960 AAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAAT 111019
||| |||||| | | ||| | | ||||| |||||| | | | ||| ||
Sbjct 12359 TGCAGATTTTGAAAAATTGTACAATAGATATGTTTCAGAAGGAAGAGGTAGAAAAACTAT 12300
Query 111020 TCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTA 111079
| ||| ||| || | |||| ||| | ||| ||||| |||||| || || || |
Sbjct 12299 TAAAGCACAAAAATTATGGTATGCTATCTTGGAAGCACAAACTGAAACAGGTACACCATT 12240
Query 111080 TATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAA 111139
|||| | || |||||| | ||| ||||||||||||| ||||||||||| || ||
Sbjct 12239 TATTGTTTACAAAGATGCTTGTAACAAAAAATCTAATCAAAAAAATTTAGGAACTATCAA 12180
Query 111140 GTCTAGTAATTTGTGCTGTG 111159
|| ||||||||| ||||
Sbjct 12179 ATCATCTAATTTGTGTTGTG 12160
>seq140
Length=127049
Score = 163 bits (180), Expect = 7e-35
Identities = 465/705 (66%), Gaps = 21/705 (3%)
Strand=Plus/Minus
Query 131489 TTCTGGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAAATTAACC 131548
|| ||||||| ||||| |||||| | |||||||||| | || ||| | || ||
Sbjct 7065 TTTTGGACTGCAGAAGAAATCGATCTTTCCAAAGATATCCACGACTGGAATAATAGAA-- 7008
Query 131549 TTGAATGAAAA----AGATTTTG--TTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGAT 131602
|||||||||| ||||||| || | |||| | ||||| ||||| | |||
Sbjct 7007 -TGAATGAAAATGAAAGATTTTTCATTAGTAGAGTTTTAGCATTTTTCGCTGCTTCAGAT 6949
Query 131603 GGCATTGTTATTGAAAATCTTGTTATTAATTTCATTCAAGAAATTGATATTCCTGAAGTA 131662
|| ||||| | ||| ||| | || ||||||| | ||| | | ||||| ||||
Sbjct 6948 GGGATTGTCAATGAGAATTTGGTGGAGAATTTCAGTGCTGAAGTGCAGATTCCAGAAGCT 6889
Query 131663 ACATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTA 131722
| || || ||| || ||| | | ||| ||| ||||| || | ||||| |
Sbjct 6888 AAATGTTTTTACGGGTTCCAAATCATGATGGAAAATATCCATAGTGAAACATATTCGCTT 6829
Query 131723 TTGATTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATTATTTG---ATGCTGTA 131779
||||| || | | | | ||| || | | || || | |||| || ||||| |
Sbjct 6828 TTGATCGATACTTATATCAAAGATCCAAAAGA---AAGTGAATTCTTGTTCAATGCTATT 6772
Query 131780 AATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGAT 131839
| | |||| ||| ||| | ||||| ||||||||||||| |||||||||||||||
Sbjct 6771 GAAACTATTCCACAAATCAAAGAAAAAGCTGAATGGGCTATTAGATGGATTCAAGATGAA 6712
Query 131840 TCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCA 131899
|| ||| || |||| | || || |||||| |||||||||| | ||||||||
Sbjct 6711 GATGCATTATTTGCTGAAAGATTGGTGGCATTTGCTGCTGTTGAAGGTGTTTTCTTTTCC 6652
Query 131900 GGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTG 131959
||| | || ||| || |||||| | ||||| || |||||||| || | | ||
Sbjct 6651 GGTTCATTTGCTGCAATTTTTTGGTTAAAGAAAAAGGGGTTGATGCCAGGTTTGACTTTT 6592
Query 131960 TCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCTATAT-TAATCTA 132018
|| ||| |||| || | |||||||||| | || ||||| ||||| || | || | |
Sbjct 6591 TCAAATGAATTGATTTGTAGAGATGAAGGGCTACACACTGATTTTGC-ATGTCTATTATT 6533
Query 132019 TAGAAAATTTGCTGATAAACTTGATGAAAATAAT--ATTAAACAACTTATAAGCGAAGCA 132076
| | | || | |||||| ||| ||| ||| | ||| || |||| | |||||
Sbjct 6532 TCAACATTTGGAAAATAAACCAGATCCAAA-AATCGCTGAAAGAA-TTATTACTGAAGCT 6475
Query 132077 GTTGATATCGAGAAGGAGTTTATTACAGAAGCTTTGCCTTGCAATTTGATTGGGATGAAT 132136
||| ||| || || | | || ||| || |||||| ||| | || ||||||
Sbjct 6474 GTTTCTATTGAAAAAAGATATTTTGAAGATGCATTGCCTGTTTCTTTATTAGGTATGAAT 6415
Query 132137 GCTGACTCTATGAAGGAGTACATTGAATTCGTTGCTGATCGTTTA 132181
|||| | ||||| | || ||||||| ||||||||| | |||
Sbjct 6414 GCTGCATTGATGAATCAATATGTTGAATTTGTTGCTGATAGATTA 6370
>seq101
Length=71874
Score = 113 bits (124), Expect = 1e-19
Identities = 133/180 (74%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 305306 AGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATG 305365
|||||| | ||||||||||| || || ||||| || ||||| || |||| ||||||
Sbjct 54917 AGACATATTGTTGACAATGATTTTGTGCTTTTCAACAGACAACCTTCTTTGCACAAAATG 54858
Query 305366 TCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGT 305425
||||||||| |||| | ||| ||||| | | | || ||| |||| ||| || |
Sbjct 54857 TCTATGATGTCTCACAGAGTTAAAGTCATGCCATATTCTACGTTTAGATTGAATTTATCT 54798
Query 305426 GCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485
| | | || |||||||| ||||||||||| |||||||||||| | || || ||||||
Sbjct 54797 GTTACCTCTCCGTATAATGCAGATTTTGATGGGGATGAAATGAATTTACACGTTCCTCAA 54738
>seq166
Length=198011
Score = 91.5 bits (100), Expect = 3e-13
Identities = 117/158 (74%), Gaps = 4/158 (3%)
Strand=Plus/Minus
Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389
||||| ||||| || ||||| || | || | | | ||||| || | ||| | | |||
Sbjct 65077 GTTCTTTTCAACAGACAACCGTCTTTACACAGACTATCTATTTTGTCCCATTATGCAAAA 65018
Query 305390 GTATTATCT-GGATTGACATTTC-GATTAAATGTAAGTGCTTGTACGCCTTATAATGCGG 305447
|| | || ||| || |||| |||| || | | ||| |||||| || |||||||| |
Sbjct 65017 GTCAGACCTTGGA--GAACTTTCAGATTGAACGAATGTGTTTGTACACCATATAATGCAG 64960
Query 305448 ATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485
|||||||||| |||||||||||| ||||||| || |||
Sbjct 64959 ATTTTGATGGTGATGAAATGAATTTGCATGTGCCACAA 64922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186808162158105
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |