Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq230 123 6e-23
seq182 123 6e-23
seq70 123 6e-23
>seq230
Length=21327
Score = 123 bits (136), Expect = 6e-23
Identities = 155/209 (74%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| |||||| | || || || || |||||| | ||||| ||| || ||||| |
Sbjct 13447 TTTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCAT 13506
Query 206238 CGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGAC 206296
||| || ||||| ||| || ||||| |||||||| ||| || ||| ||||||
Sbjct 13507 CGATAACGTCAAAGCCAAA-ATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGAT 13565
Query 206297 TTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGA 206356
| ||||| || || || || ||||||||||| || |||||| | || |||||| | || |
Sbjct 13566 TGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAA 13625
Query 206357 AAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|||| || ||||||||| | || ||||||
Sbjct 13626 AAGAATCCACTCTTCACTTGGTCTTGAGA 13654
>seq182
Length=55006
Score = 123 bits (136), Expect = 6e-23
Identities = 150/202 (74%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | ||||| ||||| || || |||||||| ||| |||||||| | ||
Sbjct 1681 AAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCCTCTGACACCATTGACAAT 1740
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||||| ||| || ||||| |||||||| || || ||| |||||| | |||||
Sbjct 1741 GTTAAAGCCAAA-ATCCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCTT 1799
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| || || || ||||||||||| || |||||| | || |||||| | || ||||| ||
Sbjct 1800 TGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAAGAATC 1859
Query 206364 TACTCTTCACCTTGTTTTGAGA 206385
|| |||||| | |||||||||
Sbjct 1860 CACCCTTCACTTGGTTTTGAGA 1881
>seq70
Length=20209
Score = 123 bits (136), Expect = 6e-23
Identities = 148/201 (74%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || || ||||| |||||||||||||| ||| || ||||| ||||
Sbjct 19789 AAAACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCCTCAGACACCATCGACAAC 19730
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || |||||||| ||| || ||| |||||| | || ||
Sbjct 19729 GTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGACCAACAAAGATTGATTTTT 19670
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || || ||||||||||| || || || ||| |||| |||||| |||| || |||||
Sbjct 19669 GCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCGACTACAACATCCAAAAGGAGTCG 19610
Query 206365 ACTCTTCACCTTGTTTTGAGA 206385
|| || ||| | |||||||||
Sbjct 19609 ACCCTCCACTTGGTTTTGAGA 19589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181816181665905
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |