Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq230 123 6e-23 seq182 123 6e-23 seq70 123 6e-23 >seq230 Length=21327 Score = 123 bits (136), Expect = 6e-23 Identities = 155/209 (74%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| |||||| | || || || || |||||| | ||||| ||| || ||||| | Sbjct 13447 TTTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCAT 13506 Query 206238 CGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGAC 206296 ||| || ||||| ||| || ||||| |||||||| ||| || ||| |||||| Sbjct 13507 CGATAACGTCAAAGCCAAA-ATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGAT 13565 Query 206297 TTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGA 206356 | ||||| || || || || ||||||||||| || |||||| | || |||||| | || | Sbjct 13566 TGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAA 13625 Query 206357 AAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 |||| || ||||||||| | || |||||| Sbjct 13626 AAGAATCCACTCTTCACTTGGTCTTGAGA 13654 >seq182 Length=55006 Score = 123 bits (136), Expect = 6e-23 Identities = 150/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | ||||| ||||| || || |||||||| ||| |||||||| | || Sbjct 1681 AAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCCTCTGACACCATTGACAAT 1740 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| || ||||| |||||||| || || ||| |||||| | ||||| Sbjct 1741 GTTAAAGCCAAA-ATCCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCTT 1799 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || || || ||||||||||| || |||||| | || |||||| | || ||||| || Sbjct 1800 TGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAAGAATC 1859 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 || |||||| | ||||||||| Sbjct 1860 CACCCTTCACTTGGTTTTGAGA 1881 >seq70 Length=20209 Score = 123 bits (136), Expect = 6e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || ||||| |||||||||||||| ||| || ||||| |||| Sbjct 19789 AAAACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCCTCAGACACCATCGACAAC 19730 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || |||||||| ||| || ||| |||||| | || || Sbjct 19729 GTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGACCAACAAAGATTGATTTTT 19670 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || ||||||||||| || || || ||| |||| |||||| |||| || ||||| Sbjct 19669 GCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCGACTACAACATCCAAAAGGAGTCG 19610 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 || || ||| | ||||||||| Sbjct 19609 ACCCTCCACTTGGTTTTGAGA 19589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181816181665905