Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq230 127 2e-24 seq182 125 6e-24 seq70 89.7 5e-13 >seq230 Length=21327 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243 ||||| ||||| ||||| || || | ||||| | ||||||||| || ||| || ||| Sbjct 13448 TTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCATC 13507 Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303 || | || ||| ||||| || ||||| ||||| || || || || |||||| | Sbjct 13508 GATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 13567 Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAA 25363 || | | || |||||| | ||||||| ||||| | | || ||||| ||||||||| Sbjct 13568 ATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 13627 Query 25364 GAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||| |||| || || || ||||||||||| || Sbjct 13628 GAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 13665 >seq182 Length=55006 Score = 125 bits (138), Expect = 6e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 25170 ACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAG 25229 |||| |||||| | || || ||||| || || || ||| | || || | ||||||||| Sbjct 1661 ACAAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAAT 1720 Query 25230 CCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCG 25289 || || || || || | || ||| ||||| || ||||| ||||| || || | Sbjct 1721 CCTCTGACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTG 1780 Query 25290 ATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATT 25349 | || |||||| | || | | || |||||| | ||||||| ||||| | | || | Sbjct 1781 ACCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACT 1840 Query 25350 ACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||| |||||||||||||||||| |||| || || || ||||||||||| || Sbjct 1841 ACAACATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGG 1892 >seq70 Length=20209 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 || |||||| | ||||| ||||| || || || ||| | ||||| | ||||| ||| || Sbjct 19807 AAAATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCC 19748 Query 25232 AACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGAT 25291 || || ||||| | || || || || || ||||| || || || || || Sbjct 19747 TCAGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGAC 19688 Query 25292 CAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATT 25349 || |||||| | |||| | || ||||| | ||||| | |||| |||| ||| | Sbjct 19687 CAACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTC--CGACT 19630 Query 25350 ACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||| || ||||| || || ||| | || || || || ||||||||||| || Sbjct 19629 ACAACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 19578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445092703077600