Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq70 127 2e-24 seq182 98.7 9e-16 seq230 82.4 7e-11 >seq70 Length=20209 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||| ||||| || | || ||||||||| |||||||| |||| | Sbjct 19578 CCACCTCTCAATCTCAAAACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGAC 19637 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || |||| |||| |||| ||| ||||| ||||| ||||| | || ||||| | ||| Sbjct 19638 AACGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGA 19697 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCAC 35688 | | || |||||| |||||| ||| | |||| | | ||||| ||||| || Sbjct 19698 ATCCCTTCTTTGTCCTGGATCTTGGACTTGAC-GTTGTCGATGGTGTCTGAGGATTCAAC 19756 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 |||| ||||| ||||| || ||||||||||| ||||| || |||||| Sbjct 19757 TTCCAAAGTGATGGTTTTCCCAGTCAAAGTTTTAACAAAAATTTGCATT 19805 >seq182 Length=55006 Score = 98.7 bits (108), Expect = 9e-16 Identities = 169/241 (70%), Gaps = 6/241 (2%) Strand=Plus/Minus Query 35501 TCTTTATTT-CCACCACGT---AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAAT 35556 ||||| ||| ||||||| | || ||||| ||||| || | || || |||||||| Sbjct 1905 TCTTTTTTTACCACCACCTCTCAATCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAAT 1846 Query 35557 GTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTG 35616 |||||| || | ||| |||| | || |||| || ||||| ||||| ||||| | || Sbjct 1845 GTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTG 1786 Query 35617 CTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGT 35675 ||||| | || | | || ||||| ||| ||| |||| | ||| | | |||| Sbjct 1785 TTGGTCAGGTGGGATACCTTCTTTGTCTTGGAT-TTTGGCTTTAACATTGTCAATGGTGT 1727 Query 35676 CGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 | ||||| || |||| || || |||||||| ||||||||||| || || || |||| Sbjct 1726 CAGAGGATTCGACTTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCA 1667 Query 35736 T 35736 | Sbjct 1666 T 1666 >seq230 Length=21327 Score = 82.4 bits (90), Expect = 7e-11 Identities = 151/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||| ||||| || | || || |||||||||||||| || | | Sbjct 13665 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 13606 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || |||| | || |||| || ||||| ||||| ||||| | || ||||| | ||| Sbjct 13605 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 13546 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT-GCCACCGTGTCGCTCGATTCCAC 35688 | | || ||||| ||| ||| |||| ||| | | |||||| ||||| || Sbjct 13545 ATACCTTCTTTGTCTTGGAT-TTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGAC 13487 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727 || | ||||| || ||||| || || ||||| ||||| Sbjct 13486 TTCTAGAGTGATAGTCTTACCAGTTAAGGTTTTGACAAA 13448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450791881349400