Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq82 486 3e-132 seq140 307 1e-78 >seq82 Length=13639 Score = 486 bits (538), Expect = 3e-132 Identities = 1465/2242 (65%), Gaps = 55/2242 (2%) Strand=Plus/Plus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 |||||||| |||| | || || | || || | | |||||||| || ||||||| | Sbjct 11184 GTAAACTGGATGGCAGCAGAAGCAGCTTGGGTTCTCAAGTAGTACATCCCTGTTTTCAAA 11243 Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493 ||| | ||| |||||||||||||| || ||||| |||| | || Sbjct 11244 CCTTTAGACCACCCGTAGAAATGCATGGAGGTCAGTTTCCCCATTGTTGGGGCCATGATG 11303 Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553 || ||||| | || ||| |||||| |||||||| ||| || || ||||| | || Sbjct 11304 TGGATATTTAGAGAGTGAGATTGATCAATGAAAGCGGATCTGTCAGCAGCCATGTCGATG 11363 Query 68554 ATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG 68613 || ||||||||| | |||||||| || || | | | ||| | || | |||| | Sbjct 11364 ATCGTCTTTTGAGACAATTCCCAAACTGTTTTGTACAAGTCTTTCAATTCTTGAGGAATG 11423 Query 68614 CTCGTA---TTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTC 68670 | | | ||||||||| || | || || || | || || |||| ||| Sbjct 11424 TTTGGCAAGTGTTGAATGGACCCGTTGTTGGCAATGATGTTTGATTTCATAGCATCGTTC 11483 Query 68671 CACAATTTTCTC-TCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCC 68729 || ||| | || ||| |||| || | | ||||| || ||||| ||||| || Sbjct 11484 CA-AATGCCCAAATCAACCAAATCTCTTAGCAAGTATGGATTGACAATTTGGAATTCACC 11542 Query 68730 AGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCC 68789 ||| ||| ||| | || ||| || || || ||||||| | | |||| || | || Sbjct 11543 AGACAACGTTCTTCTAGAGTACATGTTTGAAGTGAATGGTTCGAAACATTCGTTGTAACC 11602 Query 68790 CAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 68849 || ||||| | |||||||| |||||||| || |||| || || ||||| | || Sbjct 11603 CAAGATTTGCGATGTTGATGCTGTTGGCATTGGAGCCAATAACAATGAGTTTCTCAATCC 11662 Query 68850 ATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATT 68909 | | | ||||| ||| | | | || ||| ||||| | ||||| ||| | || Sbjct 11663 AGTTTCCACAATTTTTTCTCTCAAAGATTCCCATTCCCACAAATCAGTTGGAGCTCTATC 11722 Query 68910 CCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGG 68969 ||| | || |||| | || || | || ||| || | | | || || || Sbjct 11723 CCACATGTCAAATTGCAAAACACCTTGTGAAGCTGGTGAACCTTGGAAAGATTGGTATGG 11782 Query 68970 TCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAA 69029 ||||| | | || | ||| | || |||||| | | || | ||||||||| Sbjct 11783 ACCTTCTTCCACGGCCATTTCGTTTGAAGATTCCAATGCAGCATGGTACAATGTTTCGAA 11842 Query 69030 AATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGT-AAAAGAATAA 69088 ||| | |||| || | || |||| | ||| |||||| | | | ||||| |||| Sbjct 11843 AATTTGAATATTCAGTTGTTTGGCTTGTTCGGAATCAAATGGA-ATTCTCAAAAGCATAA 11901 Query 69089 ATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAA---C 69145 | | ||| ||||| || ||||| |||| | |||||||| |||||| ||||||| | Sbjct 11902 AAGTATCAGCCAAACCTTGAACACCAAGGGCAATAGGTCTGTGTCTCATATTTGAGTTTC 11961 Query 69146 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACTA 69205 || ||| ||| | ||| |||||||| | || || | | | || | ||||| | Sbjct 11962 TTGCAGTTTCC---ACAGGGTAATAATTTCTGTCAATGACTCTGTTCAAATTTCTTGTAA 12018 Query 69206 CTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA---------TCGTCCATCTATAA 69256 ||||| | || || | || ||| | |||||| | | | |||||| | Sbjct 12019 TGACTTTTGCAACATCGTGTAATTTTTGGAAATCATAAGTTTGTTGTTGACCATCT-TCT 12077 Query 69257 CAAACAT--ATT--------CAGTGCTACAGATGCTAGATTACAAACTGC---TACCTCA 69303 |||||| || || || | ||| || | ||||||||| || | | || Sbjct 12078 GAAACATTGATGAAAGCGGGCAAAGCAATAGAAGCCAAATTACAAACAGCAGTTTCGTCG 12137 Query 69304 TTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGA 69363 ||| | || ||||| | || || ||| | |||| |||||||||| || | | Sbjct 12138 TTA---TCTGAATATTCCACAATTTCACAACACAAATTAGATGATTTGATAGTTCCTAAA 12194 Query 69364 TTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTT 69423 |||| |||||| ||||||||||| || || ||||||| |||||| || ||||| ||| Sbjct 12195 TTTTTTTGATTAGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGTACCTGTT 12254 Query 69424 TCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAA 69483 ||| | || | ||| | |||| | ||| | || |||| || | | || || Sbjct 12255 TCAGTTTGTGCTTCCAAGATAGCATACCATAATTTTTGTGC-TTTAATA-GTTTTTCTAC 12312 Query 69484 CGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCAT 69541 | |||| ||| ||||| | || | ||| || || | || |||||||| Sbjct 12313 CTCTTCCTTCTGAAACATATCTATTGTACAATTTTTCAAAATCTGCACCATAAACATCAC 12372 Query 69542 CCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTT 69601 || || ||| |||| ||||| | | ||||| ||| | || || |||||| || Sbjct 12373 TTAAACCTGGAGCTTCACTTGGAGAAAACAATGTCCAATCTGAATTTTCTTTAACTTTTT 12432 Query 69602 TCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCAT 69661 |||||||| ||| |||| ||| | || ||| | |||||| | |||| ||||||| | Sbjct 12433 GCATAAATAAATCTGGAACCCATAATGCAGGAAACAAATCTCTTGCTCTAATTTCTTCTT 12492 Query 69662 TTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGAT 69721 | || |||||| || ||| | ||| || | ||||||| |||||||||||||| || Sbjct 12493 TACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATGCCATGGTTCTAAAT 12552 Query 69722 ATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTAT 69781 | | || | | || |||| |||||| || || ||||| | ||||| ||||| |||| Sbjct 12553 AAAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTTGCAGTATTAT 12612 Query 69782 TATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAAC 69841 | | ||||| | ||| ||||| | |||||||| | ||||| || || | ||||||| Sbjct 12613 TGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTCCCATTAGTACCTGCAATATAAG 12672 Query 69842 TTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTA 69901 || ||| | ||||||| |||| ||||| || || || || ||||||| || | Sbjct 12673 AACCGGTTGATCTAATATTATGAATATGAAGACCAATACCACCAGCAGTTTTAGAAATCA 12732 Query 69902 GAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAA 69961 |||||| ||| || || ||||| ||||| || ||| ||| ||| |||| || || Sbjct 12733 AAGCACATTCTTTTAAAGTATCATAAATACCATCAATGGAATCGTCTTTCATAGCAACAA 12792 Query 69962 GAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGT 70021 | ||||| |||||||||| | | ||||| ||||| ||||| || |||||||| | Sbjct 12793 GGAAACATGAAGACATTTGAGGTCTTGGTGTTCCAGCATTGAATAAAGTTGGAGATGCAT 12852 Query 70022 GAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACT 70081 | ||||| || | ||| | || ||| || ||||| | || ||| ||||| | Sbjct 12853 GTGTGAAATATCTCAAAGACATCAAATTATAAGTTTCCAAGACTTTTTCAATATCTGAAC 12912 Query 70082 GATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTAT 70141 |||||| || | || || | ||| | || ||| ||||||| ||| | ||| || Sbjct 12913 CATGAATCCCGACAGCAACTCTCATGATCAAATGTTGAGGTCTTTCAGCAATTTGTCCAT 12972 Query 70142 TTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGT 70201 | ||| | || | || ||| |||||| ||||| || |||||||| || ||| || | Sbjct 12973 TGATTCTTAATAAATACGATCTTTCCAATGTTTTGAAACCAAAATAATTATATTGGAAAT 13032 Query 70202 CTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCATAA 70261 |||| || |||| |||| || ||||| ||| |||| ||| || || | |||| Sbjct 13033 CTCTATCATAAACAATAGCACTATTTAAAACATCTTTATTTTTTTCTACAAT-TTGATAA 13091 Query 70262 CAGT-AGGTGAGATAATCGGAGATCGTTTA--CCATTTTTAGGATTAACATAGTTGAATA 70318 || | || || |||||| |||| |||||||| ||||||||| ||| Sbjct 13092 ACGTCATCACTAATCATTGGAGAT--TTTAATCCATTTTTTTCATTAACATAAAAATATA 13149 Query 70319 AATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTA 70378 ||||| || || | | |||| ||||||| |||| || |||||||| || || || | Sbjct 13150 AATCTGAAATGACTTGAGAAAATTGTTTTTTAGTTTGTTTATGTAAATTAGAAATAGCAA 13209 Query 70379 TTCTGGCTGCTAGAATAGCATAGTCAGGATG--TTGT-GTAGTACAAGTAGCTGCTATTT 70435 |||| || || | ||||||| |||||||| | || || || ||| | || ||| Sbjct 13210 TTCTTGCAGCCAATGTAGCATAATCAGGATGAATAGTGGTCATATAAGCACATG---TTT 13266 Query 70436 CCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTT 70495 | ||||| || |||| ||||| ||||| ||||| || | ||| | || |||| | Sbjct 13267 CAGCAGCCAAATTATCCAATTCAATAGTAGTAACACCTTCATAAACACCAGATATAATTC 13326 Query 70496 TCATGGCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAACATAATTTTCTAA 70555 | | || | |||||| || | || | | ||||||||||||| | || Sbjct 13327 TTTGTGTAATAGAAACAGGATCAATATGGTTTGGATCTAAACCATAACATAATCTAGCAA 13386 Query 70556 TACGAGATGTAATTTTATCAAA 70577 | | ||| || ||||||||||| Sbjct 13387 TTCTAGAAGTGATTTTATCAAA 13408 >seq140 Length=127049 Score = 307 bits (340), Expect = 1e-78 Identities = 619/906 (68%), Gaps = 18/906 (2%) Strand=Plus/Plus Query 39307 TTGTGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTT 39366 || || |||||| || |||||| || ||| ||| | ||| || || ||||| ||||| Sbjct 6232 TTTTGCCATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTT 6291 Query 39367 GCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAttttttttt 39426 ||| | ||||| ||||||||||| |||||||| ||||| | ||||||| | ||||| Sbjct 6292 ACCTGCTAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTC 6351 Query 39427 AAATCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTC 39486 | |||||| | | |||||||| ||||||||||| | ||| ||||||| | | Sbjct 6352 ATTACCTAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGC 6411 Query 39487 ACAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTT-CGATGT 39545 | |||||| |||| | ||| || | || || | | || ||||||| | || Sbjct 6412 AGCATTCATACCTAATAAAGAAACAGGCAATGCATCT-TCAAAATATCTTTTTTCAATAG 6470 Query 39546 CTACGGCCTCTGTTATTATCGATGTTACTACC--TCATCACTC-GGTGGATGCAATAAAT 39602 || || || || || || | || | | | | || ||| || |||| Sbjct 6471 AAACAGCTTCAGTAATAAT---TCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAAT 6527 Query 39603 GTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGT 39662 ||| ||| | || || || || ||| ||||| || |||||||||| ||| ||||| | Sbjct 6528 GTTGAAATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCAT 6587 Query 39663 TAGAAAATGTGAGTCCAGGCATTAGACCACGCTTT-TTGAGCCAAAATATGGCAGCAAAA 39721 | ||||| || | || ||||| | ||| | ||| || | |||||| || |||||||| Sbjct 6588 TTGAAAAAGTCAAACCTGGCATCA-ACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAAT 6646 Query 39722 GATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTT 39781 || || |||||||| | ||||| || || |||||||| || | ||| || | | | Sbjct 6647 GAACCGGAAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAAT 6706 Query 39782 GTATCATTATGT---ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTT-ACACAAGGCAT 39837 | ||| | || | ||||| | ||||| |||||||| |||||| | || || Sbjct 6707 GCATCTTCATCTTGAATCCATCTAATAGCCCATTCAGCTTT-TTCTTTGATTTGTGGAAT 6765 Query 39838 TGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTAT 39897 ||||| |||||||| || | | | |||| | |||||| | ||| ||||| || Sbjct 6766 AGTTTCAATAGCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGAT 6825 Query 39898 TAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACA 39957 || || ||| |||| |||||| ||||| ||| || || || ||||||||||| Sbjct 6826 CAAAAGCGAATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACA 6885 Query 39958 TCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTAT 40017 | | ||||| | ||| || || || | || || | ||| ||||||| ||||| || || Sbjct 6886 TTTAGCTTCTGGAATCTGCACTTCAGCACTGAAATTCTCCACCAAATTCTCATTGACAAT 6945 Query 40018 TCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGT 40077 ||||| ||| || |||||||| || || |||| ||| || |||||| | Sbjct 6946 CCCATCTGAAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATT 7005 Query 40078 CAAT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAA 40134 || | ||||||||||| | ||||||||| || | ||| | |||||| || |||||||| Sbjct 7006 CATTCTATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAA 7065 Query 40135 CGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAAC 40194 || || || || |||||| | ||| || ||| | |||| |||||||| | ||| Sbjct 7066 TGAAGCTTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAAC 7125 Query 40195 AAATCT 40200 |||||| Sbjct 7126 AAATCT 7131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686906181160200