Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq140 298 4e-76 seq121 188 6e-43 seq124 84.2 2e-11 >seq140 Length=127049 Score = 298 bits (330), Expect = 4e-76 Identities = 614/892 (69%), Gaps = 31/892 (3%) Strand=Plus/Minus Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756 || ||||| |||||||||| |||| ||||| || |||||| |||||| || | Sbjct 7131 AGATTTGTTTTGTTTCCAATCAAATACCATGAAATCTGGCAAGCTTACAAACGTGCTGAA 7072 Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGATTGC 43815 || ||||||||||| ||||||||| | ||| | | ||||| | ||| | |||| | Sbjct 7071 GCTTCATTTTGGACTGCAGAAGAAATCGATCTTTCCAAAGATATC-CACGACTGGAAT-- 7015 Query 43816 ATTAAAACCACAAGAAAA----ACATTTTATATCTTTGG--TTTTGGCGTTTTTTGCTGC 43869 | || || | | ||||| | ||||| || | | |||| || ||||| ||||| Sbjct 7014 AATAGAATGA-ATGAAAATGAAAGATTTTTCATTAGTAGAGTTTTAGCATTTTTCGCTGC 6956 Query 43870 GAGCGACGGGATAGTCAATGAAAATTTGGTT-AGTCGGTTTGCGCAAGAAGTTCAATTAC 43928 || ||||| |||||||| |||||||| || | | || ||||| || | | Sbjct 6955 TTCAGATGGGATTGTCAATGAGAATTTGGTGGAGAATTTCAGTGCT-GAAGTGCAGATTC 6897 Query 43929 CAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGT 43988 ||||||| ||||||||| ||||| ||||| || |||||||| ||| |||| | Sbjct 6896 CAGAAGCTAAATGTTTTTACGGGTTCCAAATCATGATGGAAAATATCCATAGTGAAACAT 6837 Query 43989 ACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAA---GCATCGATTGTTTA 44045 | ||| |||| ||||| || ||||||||| || |||| | || ||||| | Sbjct 6836 ATTCGCTTTTGATCGATACTTATATCAAAGATC--CAAAAGAAAGTGAATTC-TTGTTCA 6780 Query 44046 ATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT-- 44103 |||| || ||||| | || || ||| | ||||| || ||||| ||| |||||| Sbjct 6779 ATGCTATTGAAACTATTCCACAAATCAAAGAAAAAGCTGAATGGGCTATTAGATGGATTC 6720 Query 44104 -AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTT 44162 | || | ||| | |||| ||| || | || || ||||| | ||| ||||| ||| Sbjct 6719 AAGATGAAGATGCATTATTTGCTGAAAGATTGGTGGCATTTGCTGCTGTTGAAGGTGTTT 6660 Query 44163 TCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGT 44222 ||||||| || || ||||| || || ||||||||||||||| || |||||||| || | Sbjct 6659 TCTTTTCCGGTTCATTTGCTGCAATTTTTTGGTTAAAGAAAAAGGGGTTGATGCCAGGTT 6600 Query 44223 TGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCT 44282 |||| ||||||||||| || || || | |||||||| |||| |||||||| || Sbjct 6599 TGACTTTTTCAAATGAATTGATTTGTAGAGATGAAGGGCTACACACTGATTTTGCATGTC 6540 Query 44283 TGTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGA--CAATTACAGATATTGT 44340 | ||| || | || | ||| | |||| || || || | | | | ||| ||| | Sbjct 6539 TATTATTTCAACAT-TTGGAAA--ATAAACC-AGATCCAAAAATCGCTGAAAGA-ATTAT 6485 Query 44341 TGTAGAGGCAGTAAAGATAG-AACAAGAATTTATGACAACAGCATTACCTGTAAATTTAA 44399 | || || || || | || |||| || ||| | ||||| ||||| |||| Sbjct 6484 TACTGAAGCTGTTTCTATTGAAAAAAGATATTTTGA-AGATGCATTGCCTGTTTCTTTAT 6426 Query 44400 TAGGAATGAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTT 44459 |||| ||||||| |||||||| |||||| |||||| |||| ||| | ||| | Sbjct 6425 TAGGTATGAATGCTGCATTGATGAATCAATATGTTGAATTTGTTGCTGATAGATTATTGG 6366 Query 44460 TGGAACTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATA 44519 | | | | ||| || ||| | |||| ||| ||| || ||||||||||||||||||| Sbjct 6365 TTGCATTAGGTAATGAAAAATATTATAATGTTTCAAATCCATTTGATTTTATGGAAAATA 6306 Query 44520 TTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCA 44571 |||| || | ||| ||||| || || ||||||||| | ||| || ||||| Sbjct 6305 TTTCATTAGCAGGTAAAACCAATTTCTTTGAAAAAAGAGTTTCTGATTATCA 6254 >seq121 Length=33403 Score = 188 bits (208), Expect = 6e-43 Identities = 381/559 (68%), Gaps = 16/559 (3%) Strand=Plus/Plus Query 19232 AAGACATGCAAATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTG 19291 |||||||| |||| || ||| || ||||| || |||| ||| | |||||||||| Sbjct 4386 AAGACATGGGTGTTGGTGGGTTGGACAAGGAGTTCACTCAAATTTTTAGAAGAGCATTTG 4445 Query 19292 TGTCGCGTGTTTTTTCTGCAGATGTCATTAAACAATT-GGGATGTAAACATGTTCGTGGA 19350 || | ||||| | ||||||||||| | || ||||| | |||||| || Sbjct 4446 CCTCAAGAATTTTTCCACCAGATGTCATTGCTAAGTTGGGGATCT-CTCATGTTAAGGGT 4504 Query 19351 CTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACT---TAGT 19407 ||| | | | ||| ||||| ||| || ||||| || ||||| ||| || | || Sbjct 4505 CTTCTTTTGTTTGGTCCACCCGGTACAGGTAAAACTTTGATTGCTAGAAAAATCGGTATC 4564 Query 19408 AAATTACTTACAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATAT 19467 | || | | || | ||| |||||||| |||||||||||||| || | |||||| Sbjct 4565 ATGTTGAATGCCAAGGAGCCT---AAAATTGTTAATGGTCCTGAAATTTTGAGTAAATAC 4621 Query 19468 GTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAA 19527 || ||| || || |||||| | || ||||||| ||||| || | |||| | ||| Sbjct 4622 GTGGGTTCCTCTGAGGAAAATATTAGAAATTTGTTTAAGGACGCAGAGGCAGAATACAAA 4681 Query 19528 CGTTTAGGGCGCA-AAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTG 19586 | | || | | ||||||| ||||| ||||| || | |||||||||||| | ||| Sbjct 4682 -GCGAAAGGAGAAGAAAGTTCCTTGCATATTATCATTTTTGATGAATTGGACTCTGTCTT 4740 Query 19587 TAAGCAAAGAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACT 19640 ||||||||||| || || || | ||| || ||||| ||||||||||||| | Sbjct 4741 CAAGCAAAGAGGGTCAAGAGGTGATGGTACTGGGGTTGGTGACAATGTTGTCAATCAATT 4800 Query 19641 CCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAA 19700 | | ||| | || |||||| | || | || || ||||| |||||||| ||||| || Sbjct 4801 GTTAGCCAAAATGGATGGTGTTGATCAGTTAAACAACATTTTGGTTATTGGTATGACCAA 4860 Query 19701 TAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGA 19760 | | || || || || | ||| ||||| |||| ||| | || ||| | | | || Sbjct 4861 TCGTAGAGATTTGATCGATAACGCGTTATTGAGACCTGGTAGATTTGAAGTTCAAGTGGA 4920 Query 19761 AATTAACTTACCCGATGAA 19779 ||| || || || |||||| Sbjct 4921 AATCAAGTTGCCAGATGAA 4939 >seq124 Length=28590 Score = 84.2 bits (92), Expect = 2e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 40863 GAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATA 40918 |||||||||||||||||||||||||| ||||||| | |||||||||||||| |||| Sbjct 22295 GAAGGTGATCTTGGTCCTGTTTATGGGTTTCAGTGGAGACATTTTGGAGCAGAATA 22240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397454522581525