Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq140 298 4e-76
seq121 188 6e-43
seq124 84.2 2e-11
>seq140
Length=127049
Score = 298 bits (330), Expect = 4e-76
Identities = 614/892 (69%), Gaps = 31/892 (3%)
Strand=Plus/Minus
Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756
|| ||||| |||||||||| |||| ||||| || |||||| |||||| || |
Sbjct 7131 AGATTTGTTTTGTTTCCAATCAAATACCATGAAATCTGGCAAGCTTACAAACGTGCTGAA 7072
Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGATTGC 43815
|| ||||||||||| ||||||||| | ||| | | ||||| | ||| | |||| |
Sbjct 7071 GCTTCATTTTGGACTGCAGAAGAAATCGATCTTTCCAAAGATATC-CACGACTGGAAT-- 7015
Query 43816 ATTAAAACCACAAGAAAA----ACATTTTATATCTTTGG--TTTTGGCGTTTTTTGCTGC 43869
| || || | | ||||| | ||||| || | | |||| || ||||| |||||
Sbjct 7014 AATAGAATGA-ATGAAAATGAAAGATTTTTCATTAGTAGAGTTTTAGCATTTTTCGCTGC 6956
Query 43870 GAGCGACGGGATAGTCAATGAAAATTTGGTT-AGTCGGTTTGCGCAAGAAGTTCAATTAC 43928
|| ||||| |||||||| |||||||| || | | || ||||| || | |
Sbjct 6955 TTCAGATGGGATTGTCAATGAGAATTTGGTGGAGAATTTCAGTGCT-GAAGTGCAGATTC 6897
Query 43929 CAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGT 43988
||||||| ||||||||| ||||| ||||| || |||||||| ||| |||| |
Sbjct 6896 CAGAAGCTAAATGTTTTTACGGGTTCCAAATCATGATGGAAAATATCCATAGTGAAACAT 6837
Query 43989 ACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAA---GCATCGATTGTTTA 44045
| ||| |||| ||||| || ||||||||| || |||| | || ||||| |
Sbjct 6836 ATTCGCTTTTGATCGATACTTATATCAAAGATC--CAAAAGAAAGTGAATTC-TTGTTCA 6780
Query 44046 ATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT-- 44103
|||| || ||||| | || || ||| | ||||| || ||||| ||| ||||||
Sbjct 6779 ATGCTATTGAAACTATTCCACAAATCAAAGAAAAAGCTGAATGGGCTATTAGATGGATTC 6720
Query 44104 -AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTT 44162
| || | ||| | |||| ||| || | || || ||||| | ||| ||||| |||
Sbjct 6719 AAGATGAAGATGCATTATTTGCTGAAAGATTGGTGGCATTTGCTGCTGTTGAAGGTGTTT 6660
Query 44163 TCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGT 44222
||||||| || || ||||| || || ||||||||||||||| || |||||||| || |
Sbjct 6659 TCTTTTCCGGTTCATTTGCTGCAATTTTTTGGTTAAAGAAAAAGGGGTTGATGCCAGGTT 6600
Query 44223 TGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCT 44282
|||| ||||||||||| || || || | |||||||| |||| |||||||| ||
Sbjct 6599 TGACTTTTTCAAATGAATTGATTTGTAGAGATGAAGGGCTACACACTGATTTTGCATGTC 6540
Query 44283 TGTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGA--CAATTACAGATATTGT 44340
| ||| || | || | ||| | |||| || || || | | | | ||| ||| |
Sbjct 6539 TATTATTTCAACAT-TTGGAAA--ATAAACC-AGATCCAAAAATCGCTGAAAGA-ATTAT 6485
Query 44341 TGTAGAGGCAGTAAAGATAG-AACAAGAATTTATGACAACAGCATTACCTGTAAATTTAA 44399
| || || || || | || |||| || ||| | ||||| ||||| ||||
Sbjct 6484 TACTGAAGCTGTTTCTATTGAAAAAAGATATTTTGA-AGATGCATTGCCTGTTTCTTTAT 6426
Query 44400 TAGGAATGAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTT 44459
|||| ||||||| |||||||| |||||| |||||| |||| ||| | ||| |
Sbjct 6425 TAGGTATGAATGCTGCATTGATGAATCAATATGTTGAATTTGTTGCTGATAGATTATTGG 6366
Query 44460 TGGAACTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATA 44519
| | | | ||| || ||| | |||| ||| ||| || |||||||||||||||||||
Sbjct 6365 TTGCATTAGGTAATGAAAAATATTATAATGTTTCAAATCCATTTGATTTTATGGAAAATA 6306
Query 44520 TTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCA 44571
|||| || | ||| ||||| || || ||||||||| | ||| || |||||
Sbjct 6305 TTTCATTAGCAGGTAAAACCAATTTCTTTGAAAAAAGAGTTTCTGATTATCA 6254
>seq121
Length=33403
Score = 188 bits (208), Expect = 6e-43
Identities = 381/559 (68%), Gaps = 16/559 (3%)
Strand=Plus/Plus
Query 19232 AAGACATGCAAATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTG 19291
|||||||| |||| || ||| || ||||| || |||| ||| | ||||||||||
Sbjct 4386 AAGACATGGGTGTTGGTGGGTTGGACAAGGAGTTCACTCAAATTTTTAGAAGAGCATTTG 4445
Query 19292 TGTCGCGTGTTTTTTCTGCAGATGTCATTAAACAATT-GGGATGTAAACATGTTCGTGGA 19350
|| | ||||| | ||||||||||| | || ||||| | |||||| ||
Sbjct 4446 CCTCAAGAATTTTTCCACCAGATGTCATTGCTAAGTTGGGGATCT-CTCATGTTAAGGGT 4504
Query 19351 CTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACT---TAGT 19407
||| | | | ||| ||||| ||| || ||||| || ||||| ||| || | ||
Sbjct 4505 CTTCTTTTGTTTGGTCCACCCGGTACAGGTAAAACTTTGATTGCTAGAAAAATCGGTATC 4564
Query 19408 AAATTACTTACAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATAT 19467
| || | | || | ||| |||||||| |||||||||||||| || | ||||||
Sbjct 4565 ATGTTGAATGCCAAGGAGCCT---AAAATTGTTAATGGTCCTGAAATTTTGAGTAAATAC 4621
Query 19468 GTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAA 19527
|| ||| || || |||||| | || ||||||| ||||| || | |||| | |||
Sbjct 4622 GTGGGTTCCTCTGAGGAAAATATTAGAAATTTGTTTAAGGACGCAGAGGCAGAATACAAA 4681
Query 19528 CGTTTAGGGCGCA-AAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTG 19586
| | || | | ||||||| ||||| ||||| || | |||||||||||| | |||
Sbjct 4682 -GCGAAAGGAGAAGAAAGTTCCTTGCATATTATCATTTTTGATGAATTGGACTCTGTCTT 4740
Query 19587 TAAGCAAAGAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACT 19640
||||||||||| || || || | ||| || ||||| ||||||||||||| |
Sbjct 4741 CAAGCAAAGAGGGTCAAGAGGTGATGGTACTGGGGTTGGTGACAATGTTGTCAATCAATT 4800
Query 19641 CCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAA 19700
| | ||| | || |||||| | || | || || ||||| |||||||| ||||| ||
Sbjct 4801 GTTAGCCAAAATGGATGGTGTTGATCAGTTAAACAACATTTTGGTTATTGGTATGACCAA 4860
Query 19701 TAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGA 19760
| | || || || || | ||| ||||| |||| ||| | || ||| | | | ||
Sbjct 4861 TCGTAGAGATTTGATCGATAACGCGTTATTGAGACCTGGTAGATTTGAAGTTCAAGTGGA 4920
Query 19761 AATTAACTTACCCGATGAA 19779
||| || || || ||||||
Sbjct 4921 AATCAAGTTGCCAGATGAA 4939
>seq124
Length=28590
Score = 84.2 bits (92), Expect = 2e-11
Identities = 52/56 (93%), Gaps = 0/56 (0%)
Strand=Plus/Minus
Query 40863 GAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATA 40918
|||||||||||||||||||||||||| ||||||| | |||||||||||||| ||||
Sbjct 22295 GAAGGTGATCTTGGTCCTGTTTATGGGTTTCAGTGGAGACATTTTGGAGCAGAATA 22240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397454522581525
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |