Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq82 205 1e-47 >seq82 Length=13639 Score = 205 bits (226), Expect = 1e-47 Identities = 910/1428 (64%), Gaps = 31/1428 (2%) Strand=Plus/Plus Query 110669 TTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGT 110728 |||||||| || ||||| | | |||||||| ||| ||||||| ||| ||||| Sbjct 11523 TTGACAATTTGGAATTCACCAGACAACGTTCTTCTAGAGTACATGTTTGAAGTGAATGGT 11582 Query 110729 TCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATC 110788 || || ||||| || | |||||||||||| | || || |||||||||||||| |||| Sbjct 11583 TCGAAACATTCGTTGTAACCCAAGATTTGCGATGTTGATGCTGTTGGCATTGGAGCCAAT 11642 Query 110789 AAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAG 110848 || | ||| | | || | ||| || ||| | | | ||||| || | Sbjct 11643 AACAATGAGTTTCTCAATCCAGTTTCCACAATTTTTTCTCTCAAAGATTCCCATTCCCAC 11702 Query 110849 T--TGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAG 110906 | || |||| | | |||||||||||||| || | || ||||| || || || | Sbjct 11703 AAATCAG-TTGGAG-CTCTATCCCACATGTCAAATTGCAAAACACCTTGTGAAGCTGGTG 11760 Query 110907 AACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGG 110966 |||| | || | || || | ||||| | | |||| ||| | |||| | Sbjct 11761 AACCTTGGAAAGATTGGTATGGACCTTCTTCCACGGCCATTTCGTTTGAAGATTCCAATG 11820 Query 110967 ATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAA 111026 || || |||| ||||| || || || ||||| | ||||||| || ||||||| Sbjct 11821 CAGCATGGTACAATGTTTCGAAAATTTGAATATTCAGTTGTTTGGCTTGTTCGGAATCAA 11880 Query 111027 ATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGT 111085 ||| | | || || ||||| ||| || | |||||||||||| | |||||||| Sbjct 11881 ATG-GAATTCTCAAAAGCATAAAAGTATCAGCCAAACCTTGAACACCAAGGGCAATAGGT 11939 Query 111086 CTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACT 111145 ||||||| |||||| || |||| ||||| || || || ||| ||||||||||||||||| Sbjct 11940 CTGTGTCTCATATTTGAGTTTCTTGCAGTTTCCACAGGGTAATAATTTCTGTCAATGACT 11999 Query 111146 CGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGT- 111204 | ||| | |||| | |||| | |||| | || || | ||||| ||||| |||| Sbjct 12000 CTGTTCAAATTTCTTGTAATGACTTTTGCAACATCGTGTAATTTTTGGAAATCATAAGTT 12059 Query 111205 -----GCGAGTCTCTT------CATTGACATACTTTGGAAGGGCGATTGATGCCAAATTG 111253 || |||| |||||| | || | || || || |||||||| Sbjct 12060 TGTTGTTGACCATCTTCTGAAACATTGATGAAAGCGGGCAAAGCAATAGAAGCCAAATTA 12119 Query 111254 CAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTC 111313 |||||||| || || || ||||||| || || | |||||| ||| || || || Sbjct 12120 CAAACAGCAGTTTCGTCGTTATCTGAATATTCCACAATTTCACAACACAAATTAGATGAT 12179 Query 111314 TTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATG 111373 || || || || ||||| ||||| ||| || ||||| || ||||| ||||| | || Sbjct 12180 TTGATAGTTCCTAAATTTTTTTGATTAGATTTTTTGTTACAAGCATCTTTGTAAACAATA 12239 Query 111374 TAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGCTGGT 111433 | || || || || || || |||| || | ||||| | ||| | || | || | Sbjct 12240 AATGGTGTACCTGTTTCAGTTTGTGCTTCCAAGATAGCATACCATA-ATTTTTG--TGCT 12296 Query 111434 ACAATGGCGT---TGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCC 111490 ||| | | | | | ||| || | | || | |||| | |||||| || Sbjct 12297 TTAATAGTTTTTCTACCTCTTCCTTCTGAAACATATCTATTGTACAATTTTTCAAAATCT 12356 Query 111491 TCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCA 111550 |||| | || | |||||| || | |||| | || | | ||| | | Sbjct 12357 GCACCATAAACATCACTTAAACCTGGAGCTTCACTTGGAGAAAACAATGTCCAATCTGAA 12416 Query 111551 CCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA 111610 ||| | ||| | ||| || | ||||||| ||| | | | ||| | |||||| Sbjct 12417 TTTTCTTTAACTTTTTGCATAAATAAATCTGGAACCCATAATGCAGGAAACAAATCTCTT 12476 Query 111611 CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCG 111670 | | ||||| | ||| || || || | |||| || || | ||||| Sbjct 12477 GCTCTAATTTCTTCTTTACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTA 12536 Query 111671 TGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTAC 111726 |||||||| || | ||| | || | || || |||| | ||| |||||| || Sbjct 12537 TGCCATGGTTCTAAATAAAGAGCAAAAGCACCAGGTCTTT-TATTACCACCTTGATCAAC 12595 Query 111727 ATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATT 111786 ||| | || || || || || | || ||||||||| | |||| || ||||| Sbjct 12596 ATATCTTGCAGTATTATTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTCCCATT 12655 Query 111787 TGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCC 111846 || || |||| ||| | | ||| | || ||| || || | |||||||| || Sbjct 12656 AGTACCTGCAATATAAGAACCGGTTGATCTAATATTATGAATATGAAGACCAATACCACC 12715 Query 111847 AGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTC 111906 ||| || || || ||||| || | | ||| |||| ||||| | || || || Sbjct 12716 AGCAGTTTTAGAAATCAAAGCACATTCTTTTAAAGTATCATAAATACCATCAATGGAATC 12775 Query 111907 CTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAA 111966 || || | || | |||||| || ||||| || ||||||||||| ||||||||||| Sbjct 12776 GTCTTTCATAGCAACAAGGAAACATGAAGACATTTGAGGTCTTGGTGTTCCAGCATTGAA 12835 Query 111967 GAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGA 112025 | ||||| | ||| || |||| ||| || |||||| | || || ||||||| Sbjct 12836 TAAAGTTGGAGATGCATGTGTGAA-ATATCTCAAAGACATCAAATTATAAGTTTCCAAGA 12894 Query 112026 CAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACA 112073 | ||||| ||| || || || |||| || || | ||||| || Sbjct 12895 CTTTTTCAATATCTGAACCATGAATCCCGACAGCAACTCTCATGATCA 12942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628029605628000