Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq82 163 4e-35
>seq82
Length=13639
Score = 163 bits (180), Expect = 4e-35
Identities = 455/694 (66%), Gaps = 22/694 (3%)
Strand=Plus/Plus
Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253
||| |||| || || || || |||| |||||||||||| | ||| || ||||| |||||
Sbjct 11574 GTGAATGGTTCGAAACATTCGTTGTAACCCAAGATTTGCGATGTTGATGCTGTTGGCATT 11633
Query 118254 GGTGCCA-TGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTC 118312
|| |||| | | || | ||| | | || ||||| ||| ||| | | || ||
Sbjct 11634 GGAGCCAATAACAATGA-GTTTCTCAATCCAGTTTCCACAATTTTTTCTCTCAAAGATTC 11692
Query 118313 CCAGTCGTAGT--TGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 118370
||| || | | || ||| | | | |||||| ||||| || | | ||||||
Sbjct 11693 CCATTCCCACAAATCAG--TTGGAGCTCTATCCCACATGTCAAATTGCAAAACACCTTGT 11750
Query 118371 GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTC 118430
|| ||||| || || | || | | ||||| || || || | |||| ||||
Sbjct 11751 GAAGCTGGTGAACCTTGGAAAGATTGGTATGGACCTTCTTCCACGGCCATTTCGTTTGAA 11810
Query 118431 GCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 118490
| || | || || || |||| |||||| ||||| || ||||| | ||||| |
Sbjct 11811 GATTCCAATGCAGCATGGTACAATGTTTCGAAAATTTGAATATTCAGTTGTTTGGCTTGT 11870
Query 118491 TCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 118550
||||||||||| | | || | | ||||| ||| || | |||||| ||||| |||
Sbjct 11871 TCGGAATCAAATGGAATTCTCAAAAGCATAAAAGTATCAGCCAAACCTTGAACACCAAGG 11930
Query 118551 CCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTA 118610
|||| || | ||||||||||| || || | || || ||||| || ||| |||| ||
Sbjct 11931 GCAATAGGTCTGTGTCTCATATTTGAGTTTCTTGCAGTTTCCACAGGGTAATAATTTCTG 11990
Query 118611 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAA 118670
|| || || || || | |||| | || | || |||| | || || | |||| | ||
Sbjct 11991 TCAATGACTCTGTTCAAATTTCTTGTAATGACTTTTGCAACATCGTGTAATTTTTGGAAA 12050
Query 118671 TCAAAACT------GCGAGTCTCTTCATTGACATACTTAGGAAGG--------GCGATTG 118716
||| || | || ||||| ||| | | | | ||| | || || |
Sbjct 12051 TCATAAGTTTGTTGTTGACCATCTTC--TGAAACATTGATGAAAGCGGGCAAAGCAATAG 12108
Query 118717 ACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACA 118776
| |||| |||||| |||| || || || ||||| | || || | |||||| ||||
Sbjct 12109 AAGCCAAATTACAAACAGCAGTTTCGTCGTTATCTGAATATTCCACAATTTCACAACACA 12168
Query 118777 AGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCT 118836
| || || || || || || || || |||||||| || ||| ||||||| ||||| |
Sbjct 12169 AATTAGATGATTTGATAGTTCCTAAATTTTTTTGATTAGATTTTTTGTTACAAGCATCTT 12228
Query 118837 TGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870
|||||| || |||| || || || || |||||
Sbjct 12229 TGTAAACAATAAATGGTGTACCTGTTTCAGTTTG 12262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618432842215800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |