Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq82 230 3e-55 >seq82 Length=13639 Score = 230 bits (254), Expect = 3e-55 Identities = 900/1404 (64%), Gaps = 37/1404 (3%) Strand=Plus/Minus Query 104232 TGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACAT 104291 || ||||| | || || |||| |||||||| ||| ||||| |||||||| || | Sbjct 12942 TGATCATGAGAGTTGCTGTCGGGATTCATGGTTCAGATATTGAAAAAGTCTTGGAAACTT 12883 Query 104292 ACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGT 104350 | | |||||| || ||| |||| || ||| | ||||| | ||||||||||| Sbjct 12882 ATAATTTGATGTCTTTGAGATAT-TTCACACATGCATCTCCAACTTTATTCAATGCTGGA 12824 Query 104351 ACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAAC 104410 ||||||||||| |||||||| || |||||| | || | || || || || || | Sbjct 12823 ACACCAAGACCTCAAATGTCTTCATGTTTCCTTGTTGCTATGAAAGACGATTCCATTGAT 12764 Query 104411 GGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGG 104470 ||||| |||| ||| | | || ||||| || || || ||||| |||||||| Sbjct 12763 GGTATTTATGATACTTTAAAAGAATGTGCTTTGATTTCTAAAACTGCTGGTGGTATTGGT 12704 Query 104471 ATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCA 104530 | || || ||| || | ||| | | ||| |||| || || ||||| || Sbjct 12703 CTTCATATTCATAATATTAGATCAACCGGTTCTTATATTGCAGGTACTAATGGGACTTCT 12644 Query 104531 GATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCT 104590 |||| | ||||||||| || | || || || || || | ||||| |||||| | Sbjct 12643 AATGGATTGATTCCAATGATTAGAGTTTTCAATAATACTGCAAGATATGTTGATCAAGGT 12584 Query 104591 GGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCAT 104646 || | |||| || || | || | ||| | || |||||||| ||||| | Sbjct 12583 GGTAATA-AAAGACCTGGTGCTTTTGCTCTTTATTTAGAACCATGGCATAGTGATATTTT 12525 Query 104647 GGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTT 104706 || || |||| | || || || ||| | || || | | ||| | || Sbjct 12524 TGATTTTATTGATATTCGGAAAAATCATGGTAAAGAAGAAATTAGAGCAAGAGATTTGTT 12465 Query 104707 CTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTC 104766 | || | ||| |||||||| | || ||| | | |||| | || | | ||||| | Sbjct 12464 TCCTGCATTATGGGTTCCAGATTTATTTATGCAAAAAGTTAAAGAAAATTCAGATTGGAC 12405 Query 104767 TCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGC 104826 | |||| |||| | || || ||| | |||| |||| || |||||| Sbjct 12404 ATTGTTTTCTCCAAGTGAAGCTCCAGGTTTAAGTGATGTTTATGGTGCAGATTTTGAAAA 12345 Query 104827 CCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGT 104886 | |||| | || | |||||| | | | || | ||| | | Sbjct 12344 ATTGTACAATAGATATGTTTCAGAAGGAAGAGGTAGAAAAACTATTAAAGCACAAAAATT 12285 Query 104887 GTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGA 104946 ||| | ||||| | | | ||||| || || |||||||||| || |||||||||| Sbjct 12284 ATGGTATGCTATCTTGGAAGCACAAACTGAAACAGGTACACCATTTATTGTTTACAAAGA 12225 Query 104947 CGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTG 105006 || |||||| |||| ||||||||| ||||| || ||||| || ||| | || Sbjct 12224 TGCTTGTAACAAAAAATCTAATCAAAAAAATTTAGGAACTATCAAATCATCTAATTTGTG 12165 Query 105007 TACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAAT 105066 | ||||| |||||| | |||| || || || || ||||| ||||| | || || || Sbjct 12164 TTGTGAAATTGTGGAATATTCAGATAACGACGAAACTGCTGTTTGTAATTTGGCTTCTAT 12105 Query 105067 CGCTCTCCCCAAGT------ATGTGGATCCAGAG--------ACAA-AGACATTTGATTA 105111 ||| | ||| | |||| | |||| |||| | || | ||||| Sbjct 12104 TGCTTTGCCCGCTTTCATCAATGT---TTCAGAAGATGGTCAACAACAAACTTATGATTT 12048 Query 105112 TGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAG 105171 ||||| | ||||| ||| | ||| | || | ||| | |||||||| ||||| || Sbjct 12047 CCAAAAATTACACGATGTTGCAAAAGTCATTACAAGAAATTTGAACAGAGTCATTGACAG 11988 Query 105172 AAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCT 105231 ||||| |||||| || || ||||| | || || |||||||||||| | || |||| || Sbjct 11987 AAATTATTACCCTGTGGAAACTGCAAGAAACTCAAATATGAGACACAGACCTATTGCCCT 11928 Query 105232 CGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGA 105291 |||||||| ||| | || ||| || || |||| | ||||||||||||| | Sbjct 11927 TGGTGTTCAAGGTTTGGCTGATACTTTTATGCTTTTGAGAATTCCATTTGATTCCGAACA 11868 Query 105292 AGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAG 105351 ||| || || | ||| | || || || || |||| || || || | || | Sbjct 11867 AGCCAAACAACTGAATATTCAAATTTTCGAAACATTGTACCATGCTGCATTGGAATC--- 11811 Query 105352 TTCA---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTC 105408 |||| || |||| | || || |||||||| || | || | ||||| |||||||| Sbjct 11810 TTCAAACGAAATGGCCGTGGAAGAAGGTCCATACCAATCTTTCCAAGGTTCACCAGCTTC 11751 Query 105409 ACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGG 105466 |||||| || | |||||||| |||||||| ||| | | || | | || ||| Sbjct 11750 ACAAGGTGTTTTGCAATTTGACATGTGGGA--TAGAGCTCCAACTGATTTGTGGGAATGG 11693 Query 105467 GAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCA 105526 ||| || | | ||| || ||| | || | | ||| | | |||||||| Sbjct 11692 GAATCTTTGAGAGAAAAAATTGTGGAAACTGGATTGAGAAACTCATTGTTATTGGCTCCA 11633 Query 105527 ATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACG 105586 ||||||||||| || || | |||||||||||| | || ||||| || ||||| | ||| Sbjct 11632 ATGCCAACAGCATCAACATCGCAAATCTTGGGTTACAACGAATGTTTCGAACCATTCACT 11573 Query 105587 ACGAACATCTA-TCTGAGAAGAAC 105609 | ||||| || ||| |||||||| Sbjct 11572 TCAAACATGTACTCT-AGAAGAAC 11550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583258576318200