Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq82 230 3e-55
>seq82
Length=13639
Score = 230 bits (254), Expect = 3e-55
Identities = 900/1404 (64%), Gaps = 37/1404 (3%)
Strand=Plus/Minus
Query 104232 TGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACAT 104291
|| ||||| | || || |||| |||||||| ||| ||||| |||||||| || |
Sbjct 12942 TGATCATGAGAGTTGCTGTCGGGATTCATGGTTCAGATATTGAAAAAGTCTTGGAAACTT 12883
Query 104292 ACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGT 104350
| | |||||| || ||| |||| || ||| | ||||| | |||||||||||
Sbjct 12882 ATAATTTGATGTCTTTGAGATAT-TTCACACATGCATCTCCAACTTTATTCAATGCTGGA 12824
Query 104351 ACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAAC 104410
||||||||||| |||||||| || |||||| | || | || || || || || |
Sbjct 12823 ACACCAAGACCTCAAATGTCTTCATGTTTCCTTGTTGCTATGAAAGACGATTCCATTGAT 12764
Query 104411 GGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGG 104470
||||| |||| ||| | | || ||||| || || || ||||| ||||||||
Sbjct 12763 GGTATTTATGATACTTTAAAAGAATGTGCTTTGATTTCTAAAACTGCTGGTGGTATTGGT 12704
Query 104471 ATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCA 104530
| || || ||| || | ||| | | ||| |||| || || ||||| ||
Sbjct 12703 CTTCATATTCATAATATTAGATCAACCGGTTCTTATATTGCAGGTACTAATGGGACTTCT 12644
Query 104531 GATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCT 104590
|||| | ||||||||| || | || || || || || | ||||| |||||| |
Sbjct 12643 AATGGATTGATTCCAATGATTAGAGTTTTCAATAATACTGCAAGATATGTTGATCAAGGT 12584
Query 104591 GGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCAT 104646
|| | |||| || || | || | ||| | || |||||||| ||||| |
Sbjct 12583 GGTAATA-AAAGACCTGGTGCTTTTGCTCTTTATTTAGAACCATGGCATAGTGATATTTT 12525
Query 104647 GGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTT 104706
|| || |||| | || || || ||| | || || | | ||| | ||
Sbjct 12524 TGATTTTATTGATATTCGGAAAAATCATGGTAAAGAAGAAATTAGAGCAAGAGATTTGTT 12465
Query 104707 CTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTC 104766
| || | ||| |||||||| | || ||| | | |||| | || | | ||||| |
Sbjct 12464 TCCTGCATTATGGGTTCCAGATTTATTTATGCAAAAAGTTAAAGAAAATTCAGATTGGAC 12405
Query 104767 TCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGC 104826
| |||| |||| | || || ||| | |||| |||| || ||||||
Sbjct 12404 ATTGTTTTCTCCAAGTGAAGCTCCAGGTTTAAGTGATGTTTATGGTGCAGATTTTGAAAA 12345
Query 104827 CCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGT 104886
| |||| | || | |||||| | | | || | ||| | |
Sbjct 12344 ATTGTACAATAGATATGTTTCAGAAGGAAGAGGTAGAAAAACTATTAAAGCACAAAAATT 12285
Query 104887 GTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGA 104946
||| | ||||| | | | ||||| || || |||||||||| || ||||||||||
Sbjct 12284 ATGGTATGCTATCTTGGAAGCACAAACTGAAACAGGTACACCATTTATTGTTTACAAAGA 12225
Query 104947 CGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTG 105006
|| |||||| |||| ||||||||| ||||| || ||||| || ||| | ||
Sbjct 12224 TGCTTGTAACAAAAAATCTAATCAAAAAAATTTAGGAACTATCAAATCATCTAATTTGTG 12165
Query 105007 TACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAAT 105066
| ||||| |||||| | |||| || || || || ||||| ||||| | || || ||
Sbjct 12164 TTGTGAAATTGTGGAATATTCAGATAACGACGAAACTGCTGTTTGTAATTTGGCTTCTAT 12105
Query 105067 CGCTCTCCCCAAGT------ATGTGGATCCAGAG--------ACAA-AGACATTTGATTA 105111
||| | ||| | |||| | |||| |||| | || | |||||
Sbjct 12104 TGCTTTGCCCGCTTTCATCAATGT---TTCAGAAGATGGTCAACAACAAACTTATGATTT 12048
Query 105112 TGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAG 105171
||||| | ||||| ||| | ||| | || | ||| | |||||||| ||||| ||
Sbjct 12047 CCAAAAATTACACGATGTTGCAAAAGTCATTACAAGAAATTTGAACAGAGTCATTGACAG 11988
Query 105172 AAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCT 105231
||||| |||||| || || ||||| | || || |||||||||||| | || |||| ||
Sbjct 11987 AAATTATTACCCTGTGGAAACTGCAAGAAACTCAAATATGAGACACAGACCTATTGCCCT 11928
Query 105232 CGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGA 105291
|||||||| ||| | || ||| || || |||| | ||||||||||||| |
Sbjct 11927 TGGTGTTCAAGGTTTGGCTGATACTTTTATGCTTTTGAGAATTCCATTTGATTCCGAACA 11868
Query 105292 AGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAG 105351
||| || || | ||| | || || || || |||| || || || | || |
Sbjct 11867 AGCCAAACAACTGAATATTCAAATTTTCGAAACATTGTACCATGCTGCATTGGAATC--- 11811
Query 105352 TTCA---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTC 105408
|||| || |||| | || || |||||||| || | || | ||||| ||||||||
Sbjct 11810 TTCAAACGAAATGGCCGTGGAAGAAGGTCCATACCAATCTTTCCAAGGTTCACCAGCTTC 11751
Query 105409 ACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGG 105466
|||||| || | |||||||| |||||||| ||| | | || | | || |||
Sbjct 11750 ACAAGGTGTTTTGCAATTTGACATGTGGGA--TAGAGCTCCAACTGATTTGTGGGAATGG 11693
Query 105467 GAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCA 105526
||| || | | ||| || ||| | || | | ||| | | ||||||||
Sbjct 11692 GAATCTTTGAGAGAAAAAATTGTGGAAACTGGATTGAGAAACTCATTGTTATTGGCTCCA 11633
Query 105527 ATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACG 105586
||||||||||| || || | |||||||||||| | || ||||| || ||||| | |||
Sbjct 11632 ATGCCAACAGCATCAACATCGCAAATCTTGGGTTACAACGAATGTTTCGAACCATTCACT 11573
Query 105587 ACGAACATCTA-TCTGAGAAGAAC 105609
| ||||| || ||| ||||||||
Sbjct 11572 TCAAACATGTACTCT-AGAAGAAC 11550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583258576318200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |