Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq182 114 8e-21
seq230 102 5e-17
>seq182
Length=55006
Score = 114 bits (126), Expect = 8e-21
Identities = 166/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || || ||| || ||||||||||| || || ||
Sbjct 1892 CCACCTCTCAATCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGAC 1833
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| | ||||| | ||||||||| ||||| || || | |||||||| || ||
Sbjct 1832 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 1773
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || || |||||| ||| ||| | |||||| | ||| ||||| | || ||
Sbjct 1772 ATACCTTCTTTGTCTTGGAT-TTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGAC 1714
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
||||| ||| || |||||||| || || ||||| || ||||| ||||| |||
Sbjct 1713 TTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTTG 1662
>seq230
Length=21327
Score = 102 bits (112), Expect = 5e-17
Identities = 156/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || |||||| || ||||||||||| || || ||
Sbjct 13665 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 13606
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| | ||||| | ||||||||| ||||| || || | |||||||| || ||
Sbjct 13605 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 13546
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658
| || || |||||| ||| ||| | ||| ||| || || ||||| | || ||
Sbjct 13545 ATACCTTCTTTGTCTTGGAT-TTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGAC 13487
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAA 34698
||| | || || || ||||| ||||| ||||| ||||||
Sbjct 13486 TTCTAGAGTGATAGTCTTACCAGTTAAGGTTTTGACAAAA 13447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314728430091065
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |