Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq70 143 2e-29
seq182 140 3e-28
seq230 136 3e-27
>seq70
Length=20209
Score = 143 bits (158), Expect = 2e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| |||||| |||| || || | || ||| | ||||| ||| | ||
Sbjct 19804 ATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCCTCA 19745
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || || ||||||||||| || ||||| || |||
Sbjct 19744 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGACCAA 19685
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166
|| | || || | || || ||||| ||||||||| | || |||| ||||| |||||
Sbjct 19684 CAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCA-GAACGTTGTCCGACTACAA 19626
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||| ||||||||||||||| | || ||||||||| | ||| | |||||
Sbjct 19625 CATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 19578
>seq182
Length=55006
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || |||||| |||| || || | ||||| | ||||| ||| | ||
Sbjct 1666 ATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCCTCT 1725
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || ||| ||||| |||||||||||||| || ||||| || |||
Sbjct 1726 GACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTGACCAA 1785
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | || || |||||||||||||| || || | || || ||||||
Sbjct 1786 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 1845
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|||||||| || || ||| | || ||||||||| | ||| | |||||
Sbjct 1846 ATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGG 1892
>seq230
Length=21327
Score = 136 bits (150), Expect = 3e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
||||| ||||| | || || ||| |||| ||||| ||||| ||| | |||||| | ||
Sbjct 13448 TTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCATC 13507
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | |||||| ||||| |||||||||||||| || ||||| || ||||| | ||
Sbjct 13508 GATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 13567
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | || || |||||||||||||| || || | || || ||||||||||||||
Sbjct 13568 ATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 13627
Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || || | || ||||| ||| | ||| | |||||
Sbjct 13628 GAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 13665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434916741873600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |