Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq70 143 2e-29 seq182 140 3e-28 seq230 136 3e-27 >seq70 Length=20209 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| |||||| |||| || || | || ||| | ||||| ||| | || Sbjct 19804 ATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATCCTCA 19745 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||||||||| || ||||| || ||| Sbjct 19744 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTGACCAA 19685 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166 || | || || | || || ||||| ||||||||| | || |||| ||||| ||||| Sbjct 19684 CAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCA-GAACGTTGTCCGACTACAA 19626 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||| ||||||||||||||| | || ||||||||| | ||| | ||||| Sbjct 19625 CATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 19578 >seq182 Length=55006 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||| |||| || || | ||||| | ||||| ||| | || Sbjct 1666 ATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCCTCT 1725 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| ||||| |||||||||||||| || ||||| || ||| Sbjct 1726 GACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTGACCAA 1785 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || |||||||||||||| || || | || || |||||| Sbjct 1786 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 1845 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||||| || || ||| | || ||||||||| | ||| | ||||| Sbjct 1846 ATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGG 1892 >seq230 Length=21327 Score = 136 bits (150), Expect = 3e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 ||||| ||||| | || || ||| |||| ||||| ||||| ||| | |||||| | || Sbjct 13448 TTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCATC 13507 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | |||||| ||||| |||||||||||||| || ||||| || ||||| | || Sbjct 13508 GATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 13567 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | || || |||||||||||||| || || | || || |||||||||||||| Sbjct 13568 ATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 13627 Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || || | || ||||| ||| | ||| | ||||| Sbjct 13628 GAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 13665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434916741873600