Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq230 149 1e-30 seq70 143 6e-29 seq182 120 7e-22 >seq230 Length=21327 Score = 149 bits (164), Expect = 1e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | |||||||||||| |||||||| ||||| || || | | || || || Sbjct 13654 TCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 13595 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| || || || || ||||| | | |||||||||||| |||| ||||| || Sbjct 13594 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 13535 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| ||||| || ||| ||||| ||||||||||| ||| ||| || || |||||||| Sbjct 13534 GTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGACTTCTAGAGTGAT 13475 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| || || | || || ||||| Sbjct 13474 AGTCTTACCAGTTAAGGTTTTGACAAA 13448 >seq70 Length=20209 Score = 143 bits (158), Expect = 6e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| || || ||||| ||||||||||| || || | | || || || ||||||| ||| Sbjct 19601 GTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCCGTCTTCCAACTG 19660 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || || || || | | |||||||||||| |||| ||||| |||||||||||||| Sbjct 19661 TTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTGTCCTGGATCTT 19720 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || ||||| ||||||||||| ||| |||||| || | |||||| || || || || Sbjct 19721 GGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAAGTGATGGTTTTCCCAGT 19780 Query 211091 GAGAGTCTTTACAAACACCTGCATTTT 211117 | ||| || ||||| | |||||||| Sbjct 19781 CAAAGTTTTAACAAAAATTTGCATTTT 19807 >seq182 Length=55006 Score = 120 bits (132), Expect = 7e-22 Identities = 159/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 |||||| ||||| |||||||| ||||| || || | | || || |||||||||| || Sbjct 1869 GTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTG 1810 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || || ||||| | | |||||||||||| || | ||||| ||||| ||||| || Sbjct 1809 TTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTCTTGGATTTT 1750 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||| || || || |||||||||||| ||| || || | || || || || || || Sbjct 1749 GGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAATGGTTTTACCTGT 1690 Query 211091 GAGAGTCTTTACAAACACCTGCATTTTATGGTTACTTGATG 211131 | ||| || || || | ||||| || | | | |||||| Sbjct 1689 CAAAGTTTTAACGAAAATTTGCATCTTGTCGGCAGTTGATG 1649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159147470251325