Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq230 149 1e-30
seq70 143 6e-29
seq182 120 7e-22
>seq230
Length=21327
Score = 149 bits (164), Expect = 1e-30
Identities = 157/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | |||||||||||| |||||||| ||||| || || | | || || ||
Sbjct 13654 TCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 13595
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| || || || || ||||| | | |||||||||||| |||| ||||| ||
Sbjct 13594 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 13535
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| ||||| || ||| ||||| ||||||||||| ||| ||| || || ||||||||
Sbjct 13534 GTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGACTTCTAGAGTGAT 13475
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||||| || || | || || |||||
Sbjct 13474 AGTCTTACCAGTTAAGGTTTTGACAAA 13448
>seq70
Length=20209
Score = 143 bits (158), Expect = 6e-29
Identities = 156/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| || || ||||| ||||||||||| || || | | || || || ||||||| |||
Sbjct 19601 GTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAACGTTCTGCCGTCTTCCAACTG 19660
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
|| || || || || | | |||||||||||| |||| ||||| ||||||||||||||
Sbjct 19661 TTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGAATCCCTTCTTTGTCCTGGATCTT 19720
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| ||||| ||||||||||| ||| |||||| || | |||||| || || || ||
Sbjct 19721 GGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCCAAAGTGATGGTTTTCCCAGT 19780
Query 211091 GAGAGTCTTTACAAACACCTGCATTTT 211117
| ||| || ||||| | ||||||||
Sbjct 19781 CAAAGTTTTAACAAAAATTTGCATTTT 19807
>seq182
Length=55006
Score = 120 bits (132), Expect = 7e-22
Identities = 159/221 (72%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
|||||| ||||| |||||||| ||||| || || | | || || |||||||||| ||
Sbjct 1869 GTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTG 1810
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
|| || || ||||| | | |||||||||||| || | ||||| ||||| ||||| ||
Sbjct 1809 TTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTCTTGGATTTT 1750
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
||| || || || |||||||||||| ||| || || | || || || || || ||
Sbjct 1749 GGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAAGGTAATGGTTTTACCTGT 1690
Query 211091 GAGAGTCTTTACAAACACCTGCATTTTATGGTTACTTGATG 211131
| ||| || || || | ||||| || | | | ||||||
Sbjct 1689 CAAAGTTTTAACGAAAATTTGCATCTTGTCGGCAGTTGATG 1649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159147470251325
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |